Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1784 ATGGAGTTCCTCTCTTTACTCTATGCAGTTCCAGCATTGTACATTTGCTACAAAATCTGGAAACTATTAGATCAAAAGAGGGACCAAGAGTGTTACATATTAGATTACCAATGTTACAAGCCAACAGAAGATAGAATGTTAGGGACAGAGTTTTGTGGCAAATTAATCAAAAGAACAGAGAATTTGGGACTAAATGAGTACAAATTTCTCCTCAAAGCAATTGTAAGTTCCGGAATTGGCGAACAAACTTATGCACCAAGAAACATCTTCGAAGGCCGCGAAGGATCACCAACATTAAACGACGGGATCTCAGAAATGGAAGAGTTTTTCGACGACAGCATTGCAAAACTCCTCGCAAGGTCAGCGATTTACCCTTCCGAAATCGATGTTCTTGTTGTCAACATCGCAATGTTCGCGCCTCTTCCTTCTCTATCGTCGCACATCATTAACCGTTATAAAATGAGACACGACATAAAAGTGTACAATCTCACCGCAATGGGTTGTAGTGCTAGCCTTATATCATTAGACATTATTCAAAACATTTTCAAATCACAAAAGAACAAATTAGCACTTTTGGTCACATCAGAGGCTCTTAGTCCAAATTGGTATACAGGCAATGATAGATCAATGATCTTAGCGAACTGTCTCTTCCGCTCGGGCGGTTGTGCGGTTCTTTTAACAAACAAAACATCTTTAAAGGACAATAGTATACTAAAATTGAAGTGTTTAGTCAGAACACACCACGGCGCGCGAGAAGACTCTTACAATTCTTGCCTCCAAATGGAAGATGACCAGGGTAGGCTTGGTGTTTATTTAGGGAAAAATCTCCCAAAAGCAGCAACAACAGCTTTTGTTGACAATTTAAGGGTAATTTCTCCCAAAATTTTGCCAACAAGAGAATTACTTAGGTTTCTTGTTGTTTTACTTTTCAAGAAACTTAAGATATTTAGTTCAACTGCTTCTTCTAAGTCTAGTGGTGGAACAATAACTACAAAATCACCATTGAATTTCAAAAGTGGTGTAGATCATTTTTGTCTCCATACAGGAGGAAAAGCAGTGATAGATGGAGTTGGAATGAGTTTAGATCTATCCGAATACGATCTCGAGCCAGCAAGAATGACACTTCATCGTTTTGGTAACACTTCTGCAAGTAGTTTATGGTATGTGTTAGGATATATGGAAGCAAAAAAGAGGCTAAAAAAAGGTGATAGAGTTTTTATGATAAGTTTTGGTGCTGGTTTTAAATGCAATAGTTGTTTGTGGGAAGTGATGAAAGATGTTAATGGAGATGGAAATGTTTGGGAAGATTGTGTTGATCATTATCCACCTGAATCTTTGGCTAATGCTTTTATGGAAAAGTATGGTTGGCTCAATGAAGTTGAAGATCCTGACAACTATGAATTTCCTGATTTTCTTAAGTGA 1422 0.3776 MEFLSLLYAVPALYICYKIWKLLDQKRDQECYILDYQCYKPTEDRMLGTEFCGKLIKRTENLGLNEYKFLLKAIVSSGIGEQTYAPRNIFEGREGSPTLNDGISEMEEFFDDSIAKLLARSAIYPSEIDVLVVNIAMFAPLPSLSSHIINRYKMRHDIKVYNLTAMGCSASLISLDIIQNIFKSQKNKLALLVTSEALSPNWYTGNDRSMILANCLFRSGGCAVLLTNKTSLKDNSILKLKCLVRTHHGAREDSYNSCLQMEDDQGRLGVYLGKNLPKAATTAFVDNLRVISPKILPTRELLRFLVVLLFKKLKIFSSTASSKSSGGTITTKSPLNFKSGVDHFCLHTGGKAVIDGVGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDRVFMISFGAGFKCNSCLWEVMKDVNGDGNVWEDCVDHYPPESLANAFMEKYGWLNEVEDPDNYEFPDFLK* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1784 473 SUPERFAMILY Thiolase-like 26 424 IPR016039 GO:0016746
Tpr4g1784 473 PANTHER 3-KETOACYL-COA SYNTHASE 1 463 - -
Tpr4g1784 473 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 340 422 IPR013747 -
Tpr4g1784 473 Pfam FAE1/Type III polyketide synthase-like protein 25 313 IPR013601 GO:0006633|GO:0016020|GO:0016747
Tpr4g1784 473 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 456 IPR012392 GO:0006633|GO:0016020|GO:0016747
Tpr4g1784 473 PANTHER 3-KETOACYL-COA SYNTHASE 1 463 IPR012392 GO:0006633|GO:0016020|GO:0016747
Tpr4g1784 473 Gene3D - 66 423 IPR016039 GO:0016746
Tpr4g1784 473 CDD CHS_like 12 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1784 Tpr-Chr4 18570306 18572466 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1784 14 470 Acyl Lipid Metabolism Gene Families AT1G07720 68.803 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1784 K15397 - gmx:100809149 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4445 7 53250056 53252174 Tpr4g1784 4 18570306 18572466 PCT