Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1506 ATGGCTGAAGTACTACACCAAGAACAATCACCATCTTCTTCTTCTTCATCTTCTTTTTCTTCTTTAGCCGTAGCAGTGAACAATAGTTTTTCTATGGTAACTGACTGTGAAGCAGAGGAGATGAATGTCACAGAGAGAGAAAAGACAGCACAAGAACTATCCCTTTTGGCCATTCTTGTGACCCTTTTCAGGAAAACCTTTATTTCTTGCTCCACTGATGTTGCCATGGAAATTGGTCACCCTACTAACGTGCGCCATGTTGCGCATGTTACTTTTGATAGGTTTAATGGTTTCTTGGGTTTGCCTCTTGAGTTTGTACCTCAAGTCCCTACTACACCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGAAGTTATCATATGACACAAGAGGGAACATTGTGCCAACAATTCTACTACTAATGCAAGAACACTTGTATGCTCAAGGAGGATTACAGGCAGAGGGAATTTTCAGAATTAATGCAGACAATAGACAAGAGGAAAATGTTAGGGATCAGTTAAATAAAGGAGTGGTCCCTCAAAACATTGATGTACATTGTTTAGCAGGTTTGATTAAGGCTTGGTTTAGGGAGCTGCCAAGAGGTGTTCTGGATTCTTTATCTCCAGATCAGATAATGCAATGTCAAACAGAAGAGGATTGTGCCGAACTGTCAAATCAGCTACCTCATACTGAAGCTTCCCTTTTGGATTGGACTATCAATCTCATGGCTGATGTTGTACAAGAGGAACATCTGAATAAGATGAATGCACGCAACATCGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATAAATTTCTTGAAGACACTTGTATCAAGGACACTAAGGGCAAGGAAGATGTTGCAAGATGATAATAGTCTTTTGAAGTCATGCCAACAAGATGTTGATGGAACAGAAAATGAAGTGCTAATCAATGAAGCAATTTGA 1002 0.4022 MAEVLHQEQSPSSSSSSSFSSLAVAVNNSFSMVTDCEAEEMNVTEREKTAQELSLLAILVTLFRKTFISCSTDVAMEIGHPTNVRHVAHVTFDRFNGFLGLPLEFVPQVPTTPPSASATVFGVSTESMKLSYDTRGNIVPTILLLMQEHLYAQGGLQAEGIFRINADNRQEENVRDQLNKGVVPQNIDVHCLAGLIKAWFRELPRGVLDSLSPDQIMQCQTEEDCAELSNQLPHTEASLLDWTINLMADVVQEEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVINFLKTLVSRTLRARKMLQDDNSLLKSCQQDVDGTENEVLINEAI* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1506 333 ProSiteProfiles CRIB domain profile. 78 91 IPR000095 -
Tpr4g1506 333 Gene3D Rho GTPase activation protein 111 309 IPR008936 GO:0007165
Tpr4g1506 333 CDD CRIB 76 119 - -
Tpr4g1506 333 SMART RhoGAP_3 137 300 IPR000198 GO:0007165
Tpr4g1506 333 SUPERFAMILY GTPase activation domain, GAP 118 297 IPR008936 GO:0007165
Tpr4g1506 333 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 304 - -
Tpr4g1506 333 Pfam RhoGAP domain 140 274 IPR000198 GO:0007165
Tpr4g1506 333 Gene3D CRIB domain 74 108 IPR036936 -
Tpr4g1506 333 SMART PBD_5 78 112 IPR000095 -
Tpr4g1506 333 CDD RhoGAP 140 297 - -
Tpr4g1506 333 Pfam P21-Rho-binding domain 77 102 IPR000095 -
Tpr4g1506 333 PANTHER MKIAA1688 PROTEIN 1 304 IPR044785 GO:0005096
Tpr4g1506 333 ProSiteProfiles Rho GTPase-activating proteins domain profile. 123 300 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1506 Tpr-Chr4 14832484 14835611 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1506 - K20642 mtr:MTR_4g052850 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1506 4 14832484 14835611 Tpr4g1506 4 14832484 14835611 ECH
Tpr7g3854 7 47799287 47802567 Tpr4g1506 4 14832484 14835611 PCT