Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0692 ATGCAGCACAATATTTTTACTACAATGCGTAGTTTAAAGATCATGGATGGTTGCAAAGGTTCTCAGGTTTATGCTGTCCACCGTCCTTCTTCTGGTGGAGGAAGTGGTGGAATTGGTGAAAAGCTTCTTCAACAGCTTCATGATCATATTAAAAGTCAAACCTTTAGAAGCAAATCGGTTCGAAATTACCAACCACCAAATCAGACACCGAATCATACACCGAATCAGACACCGTCTGAGGTTGTTGCTGAGGGTTCTCTTTTGCCTTATGGACTTCCTATGACAGACCTTCTTGAGCCGAAGATTGAGCCGTTTTTAAGGCCGGTTGATTTCGTCGAAAGGCTAGCTGAAATTCATAATAAGATTGAGAATTGTTTGGAGGTTGATAGGTCTGAGGTTTATTTGGAGCATTGTACCGTTTTTAGGGGATTATCCGATGCCAAATTGTTTCGTAGGAGTTTGAGGTCAGCACGACAACATGCTGTCGATGTCCACAACAAAGTCGTGTTGGCCTCATGGCTTAGGTATGAGAGGAGGGAAGACGAAATGATTGGTTCTTCCTCGATGGATTGTTGTGGAAGGAATATTGAATGCCCTAAGGCTACATTGGTGGCAAATGGGTATGATCCTGAATTGGTTTATGATCGTTGTTGCTGTCGTCGTGATCGTGAGGGTGAGGATGAGGATGAGGAGGATTTAATGACATTGGTTGTTGATGATCAAGAATGCTCTACGTCGGATGAGGATGATGGAGGTGGGGATATGTCATTTTGTATTGGTGATGATGAAATTAGGTGTCATAGGTTCAATATGGCTTCACTTTCAAGGCCGTTTAAGACAATGTTGTATGGGGGATTCATAGAATCAAGGAGGGAGAAGATAAATTTTTCGAAGAATGAGATTTCTGTTGAGGCAATGAGGGCTGCCGAGGTTTTTAGTAGGACAAAAAGTTTGAGCACCATCGAACCTAATGTGGTTTTGGAGTTGTTATCTTTGGCGAACCGGTTTTGTTGCGAGGAGATGAAGTGTGCCTGCGACGCGCACTTGGCGTTGTTGGTTTGTGACATGGAGGATGCCTCATTGCTCATCGAGTATGGACTTGAGGAGACTGCATATCTTTTGGTTGCAGCTTGCTTGCAGGTGTTTCTGCGGGAGCTACCCGTTTCAATGGAGTGTTCATGTTTTGCGAAATTGTTTTGTAGTCCAGAGGGCAGGGATAGGCTTGCTACGGCAGGGCATGCGTCGTTTGTGTTGTATCATTTCTTGAGTCAAGTGGCCATGGAGGAGGAGATGCGGTCGAACACAACCGTGATGCTGTTGGAGAGATTAGCAGAGTGTGCAAAAGATGGGTGGGAGAAGCAACTAGCATATCACCAATTAGGTGTTGTTATGTTTGAGAGAAAAGAATACAAAGATGCACAACATTGGTTCGAGGCAGCAGTGGAGGCAGGCCACGTTTATTCGTTAGTTGGAGTTGCAAGGGCAAAATATAAACGAGGCCATACATATTCGGCATATAAGTTGATGAACTCCCTTATTAATGATTATAAACCTGTTGGTTGGATGTATGAGGAAAGGTCTTTGTATTGTATTGGGAAGGAAAAAATGATGGACTTGATCTCAGCGACCGAATTAGATCCAACACTTTTGTTTCCTTATAAATTCCGAGCTGTTTCTTTGCTTGAGGAGAACAGGATTGGAGCTGCCATTGCAGAAATAAACAAAATACTTGGTTTCAGAGTTTCTCCTGACTGCCTTGAGTTAAGGGCTTGGTTCTTGATTGCCACGGAGGATTACGATGCAGCACTTAGAGATGTTCGGGCAATTTTGACATTGGACCCAGATTATATGATGTTCCACGGGAATATGCACGGTAATCACTTGGTAGAACTACTTGGTCCTGTTGTTCAGCAGTACAATCAGGCTGATTGCTGGATGCAATTGTACGACCGATGGTCCTCTGTCGATGATATTGGTTCATTGGCTGTTGTACACCAGATGTTAGAAAACGATCCGGGGAAAAGTCTTTTGCGTTTTCGGCAATCTCTCCTTTTGTTACGGCTAAATTGTCAAAAGGCTGCCATGCGTAGTTTGCGGCTGGCTAGAAATCATTCTACTTCTGACTATGAAAGGCTTGTCTATGAAGGATGGATATTGTATGACACTGGTCATCGTGAAGAAGCACTAGCAAAGGCTGAGGAGTCCATTTCTATTCAAAGATCATTTGAAGCTTACTTTCTCAAAGCTTATGCATTGGCCGACTCAAGTCTTGATTCAGAGTCTTCAAAGTATGTTATCCATCTCTTGGAAGAAGCTCTTAGATGTCCTTCAGATGGTCTTCGGAAAGGACAAGCACTGAATAATCTCGGGAGCGTCTACGTAGATTGTGATAAGCTGGACCTTGCAGCTGACTGCTACATGAATGCACTCAATATCAAGCATACACGAGCGCATCAGGGGTTGGCGCGTGTATATCATCTTAAAAATCATCGCAAAGCTGCATATGATGAGATGACAAAGCTAATAGAAAAGGCTTGCAACAATGCATCAGCTTATGAGAAACGGTCGGAGTATTGTGATCGTGACATGGCAAAGAGCGATCTTACTATGGCAACACTGTTGGATCCTCTAAGGACTTATCCTTACAGATATAGGGCAGCAGTTTTAATGGATGATCATAAGGAAGCTGAAGCAATTGAAGAGCTTTCAAGAGCCATTGAATTTAAGCCAGATCTGCAACTATTACATCTTAGAGCAGCCTTTTACGATTCAATTAATGATTTCGCTTCTACCATCCGAGACTGTCAAGCAGCACTTTGTTTTGATCCTGGATACGCCGAGACGCTTGAGCTTTGTAATAAAGCACGGGAGCGGATTAAAGAACAAAAGTGA 2892 0.4326 MQHNIFTTMRSLKIMDGCKGSQVYAVHRPSSGGGSGGIGEKLLQQLHDHIKSQTFRSKSVRNYQPPNQTPNHTPNQTPSEVVAEGSLLPYGLPMTDLLEPKIEPFLRPVDFVERLAEIHNKIENCLEVDRSEVYLEHCTVFRGLSDAKLFRRSLRSARQHAVDVHNKVVLASWLRYERREDEMIGSSSMDCCGRNIECPKATLVANGYDPELVYDRCCCRRDREGEDEDEEDLMTLVVDDQECSTSDEDDGGGDMSFCIGDDEIRCHRFNMASLSRPFKTMLYGGFIESRREKINFSKNEISVEAMRAAEVFSRTKSLSTIEPNVVLELLSLANRFCCEEMKCACDAHLALLVCDMEDASLLIEYGLEETAYLLVAACLQVFLRELPVSMECSCFAKLFCSPEGRDRLATAGHASFVLYHFLSQVAMEEEMRSNTTVMLLERLAECAKDGWEKQLAYHQLGVVMFERKEYKDAQHWFEAAVEAGHVYSLVGVARAKYKRGHTYSAYKLMNSLINDYKPVGWMYEERSLYCIGKEKMMDLISATELDPTLLFPYKFRAVSLLEENRIGAAIAEINKILGFRVSPDCLELRAWFLIATEDYDAALRDVRAILTLDPDYMMFHGNMHGNHLVELLGPVVQQYNQADCWMQLYDRWSSVDDIGSLAVVHQMLENDPGKSLLRFRQSLLLLRLNCQKAAMRSLRLARNHSTSDYERLVYEGWILYDTGHREEALAKAEESISIQRSFEAYFLKAYALADSSLDSESSKYVIHLLEEALRCPSDGLRKGQALNNLGSVYVDCDKLDLAADCYMNALNIKHTRAHQGLARVYHLKNHRKAAYDEMTKLIEKACNNASAYEKRSEYCDRDMAKSDLTMATLLDPLRTYPYRYRAAVLMDDHKEAEAIEELSRAIEFKPDLQLLHLRAAFYDSINDFASTIRDCQAALCFDPGYAETLELCNKARERIKEQK* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0692 963 SUPERFAMILY TPR-like 456 911 IPR011990 GO:0005515
Tpr4g0692 963 SUPERFAMILY TPR-like 556 814 IPR011990 GO:0005515
Tpr4g0692 963 PANTHER ETHYLENE-OVERPRODUCTION PROTEIN 1 1 962 - -
Tpr4g0692 963 PANTHER ETO1-RELATED 1 962 IPR044631 GO:0010105
Tpr4g0692 963 SMART BTB_4 253 353 IPR000210 GO:0005515
Tpr4g0692 963 Coils Coil 835 855 - -
Tpr4g0692 963 MobiDBLite consensus disorder prediction 55 79 - -
Tpr4g0692 963 ProSiteProfiles TPR repeat profile. 783 816 IPR019734 GO:0005515
Tpr4g0692 963 Gene3D Tetratricopeptide repeat domain 859 963 IPR011990 GO:0005515
Tpr4g0692 963 Gene3D Potassium Channel Kv1.1; Chain A 247 393 IPR011333 -
Tpr4g0692 963 SMART tpr_5 709 742 IPR019734 GO:0005515
Tpr4g0692 963 SMART tpr_5 879 912 IPR019734 GO:0005515
Tpr4g0692 963 SMART tpr_5 583 616 IPR019734 GO:0005515
Tpr4g0692 963 SMART tpr_5 783 816 IPR019734 GO:0005515
Tpr4g0692 963 Pfam BTB/POZ domain 254 349 IPR000210 GO:0005515
Tpr4g0692 963 Gene3D Tetratricopeptide repeat domain 674 846 IPR011990 GO:0005515
Tpr4g0692 963 Gene3D Tetratricopeptide repeat domain 436 622 IPR011990 GO:0005515
Tpr4g0692 963 MobiDBLite consensus disorder prediction 56 79 - -
Tpr4g0692 963 SUPERFAMILY POZ domain 253 349 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0692 Tpr-Chr4 6373846 6379301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0692 - - gmx:100794758 1513.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0692 4 6373846 6379301 Tpr4g0692 4 6373846 6379301 ECH
Tpr6g2239 6 24358213 24364591 Tpr4g0692 4 6373846 6379301 PCT