Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0649 ATGCAAAGATTCCATCTTGGTATCTCTCAAAATCAAAACTTGATGATGAATTCTTCTTCATCTCCTCTTTCTCTTCAACCCCAAAAATCACCTTTTCAAGACCCACTTGAAGATTCCTCACCAAAACAAACCAAAAAAACCTTACTTTCTTCTCTAATGGGTAGTAGTAACAACAATAACAACTCTTCTTCAACTCTTAGAACACCTTCTTTTGAAGAAGATAACTACTTTGTCACTCTTCTCAAATCCTCAGAGAAAAAAGCACTTCAAGACCTCAAAAAAAGCCTCCTTGAAGCAACTTCTAATGGAGTTGAAGTTGGTGTTTCCATGTGGGGTATTCCTCTTCTTGGTGGTGATGACAGAGCTGATGTAATCCTCTTGAAATTTTTAAGAGCAAGAGATTTCAGAGTTAATGAAGCACTAAACATGATTATAAAGTGTTTAGCTTGGAGAAAAGAGTTTAATGCTGACACAATAGTTGAAGAAGATTTGAGTCAATTCAAAGAGCTTGAAGGTGTTATAGCTTATATGCAAAGCTATGACAAAGAGGGTCACCCTGTTTGCTACAATGCTTATGGTTTGTTTAGAGATAAAGAAATGTATGAGAGAATTTTTGGTGATGAAGAAAAGCTTAAGATGTTTCTTAGATGGAGAGTTCAAGTTCTTGAAAGAGGTATTAGGCTTCTTCATTTTAAGCCTGGTGGTGTTAATTCTCTTATTCAAGTTACTGATCTTAAGGATATGCCTAAAAGAGAATTAAGGGTTGCTTCTAACCATATCATGTCACTCTTTCAAGATAACTACCCTGAAATGGTTGCTAGAAAGATTTTCATCAATGTGCCATGGTACTTCAGTATGTTGTATTCAATGTTTAGTCCATTTTTGACACAAAGGACTAAGAGCAAGTTTGTGATCTCAAAGGAAGGAAATGCTGCTGAGACACTCTACAAATTCATTAGACCTGAGGATATTCCTGTTCAGTATGGAGGGCTGAATGTTCCAAGTGATTTGCAAAATGGTCCCCCAAAACCTGCTTCTGAATTCACTGTCAAAGGAGGGGAGAAAGTGAATATACAAATAGAAGGAATTGAGGGAGGTGCAACTATCACTTGGGACATTGTTGTGGGAGGTTGGGACTTAGAATACAGTGTTGAGTTTGTCCCAAATGCTGAAGGAAGCTACACTATAGCAGTTTCAAAGCCAAAAAAGATCGGAGCCTCAGAACTAGCAATTCACAACTCATTCACATCAAAAGAATCGGGCAAAATGATACTCTCGGTCGACAACACTGCCTCCAGGAAGAAAAAAGTCGCTGCTTATCGTTATGTTGTCCGCAAATGTGCCACCACTTGA 1353 0.3792 MQRFHLGISQNQNLMMNSSSSPLSLQPQKSPFQDPLEDSSPKQTKKTLLSSLMGSSNNNNNSSSTLRTPSFEEDNYFVTLLKSSEKKALQDLKKSLLEATSNGVEVGVSMWGIPLLGGDDRADVILLKFLRARDFRVNEALNMIIKCLAWRKEFNADTIVEEDLSQFKELEGVIAYMQSYDKEGHPVCYNAYGLFRDKEMYERIFGDEEKLKMFLRWRVQVLERGIRLLHFKPGGVNSLIQVTDLKDMPKRELRVASNHIMSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLNVPSDLQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSVEFVPNAEGSYTIAVSKPKKIGASELAIHNSFTSKESGKMILSVDNTASRKKKVAAYRYVVRKCATT* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0649 450 Gene3D - 79 153 - -
Tpr4g0649 450 ProSiteProfiles GOLD domain profile. 312 446 IPR009038 -
Tpr4g0649 450 MobiDBLite consensus disorder prediction 18 45 - -
Tpr4g0649 450 PANTHER PATELLIN-6 33 448 - -
Tpr4g0649 450 CDD SEC14 164 331 IPR001251 -
Tpr4g0649 450 Pfam CRAL/TRIO, N-terminal domain 95 146 IPR011074 -
Tpr4g0649 450 SUPERFAMILY CRAL/TRIO domain 169 333 IPR036865 -
Tpr4g0649 450 Gene3D GOLD domain 341 444 - -
Tpr4g0649 450 SUPERFAMILY CRAL/TRIO N-terminal domain 82 163 IPR036273 -
Tpr4g0649 450 Gene3D - 157 340 IPR036865 -
Tpr4g0649 450 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 347 444 IPR036598 -
Tpr4g0649 450 PANTHER PATELLIN-1 33 448 IPR044834 GO:0008289
Tpr4g0649 450 SMART CRAL_TRIO_N_2 122 147 IPR011074 -
Tpr4g0649 450 Pfam CRAL/TRIO domain 171 330 IPR001251 -
Tpr4g0649 450 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 161 336 IPR001251 -
Tpr4g0649 450 SMART sec14_4 169 333 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0649 Tpr-Chr4 6027200 6030845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0649 126 325 Acyl Lipid Metabolism Gene Families AT1G55840 26.540 1.52e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0649 - - gmx:100809944 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0649 4 6027200 6030845 Tpr4g0649 4 6027200 6030845 ECH
Tpr6g2204 6 23934214 23937069 Tpr4g0649 4 6027200 6030845 PCT