Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0334 ATGGGTTTAGAATCTTGTGATTCAGCTGACAACATCAACAACCCTTTGTTACTCAATCAAATCCAATCTCATCCTATCAAAAGAACAGGGACTGTATGGACAGCAGTTGCACACATAGTGACAGGGGTGATAGGATCAGGAGTGTTATCTTTGCCATGGAGTATTGCACAACTTGGATGGATTGTAGGACCATTCTCTATACTCCTTATTGCTTCTTCAACTCTTTACTCAGCTTTTCTTCTATGCAACACTTATAGATCTCCAAATCCTGAATATGGTCCTCACAGAAGTGCTTCTTATCTTGATGTTGTCAATTTTAATTTAGGAGTAGGGAATGGAAGACTATGTGGCCTTCTTGTGAATATATGTATATATGGTTTTGGAATTGCCTTTGTCATTACAACATCTATCAGCTTAAGAGCAATCCAAAACTCATTTTCTCGACACAACAAAGAGAATGAAACAGTGAGCGAATTTGCAGATGCATATTATATGCTGATATTTGGAATTGTCCAAATTGTTCTCTCACAGATACCAAACTTACATAACATCAATTGGTTATCTGTTGTCGCTGCAATTACATCATTTGCTTATTGTTTCATAGGAATGGGACTTTCCATCATGCAAATCATGGAAAATGGATATGCTAAGGGTAGTATTGATGGAATCAGTACCTCTAGTGGAACTCAGAAGTTGTGGTTGGTTTCCCAAGCACTCGGTGACGTGTCGTTCTCCTATCCTTTCTCGACAATTATGATGGAAATACAGGATACTTTGAAGACGCCTCCACCAGAAAACCAAACAATGAAAAAGGCCTCAGTAATATCAGTATCTATCACAACATTCTTTTACCTATGTTGTGGATGTGCTGGATATGCTGCATTTGGCGATAATACACCAGGAAACCTTTTAACAGGATTCGGATCCTCCAAGTATTATTGGCTTGTCGACTTTACTCATGTTTGTATAGTGGTTCACCTAGTTGGTTCATATCAGGTATACAGCCAACCACTTTTTGGCAATGCCGAGAATTGGTTCCGTTTAAATTACTCAGACAGTGAATTTGTGAATCACACATATACCTTGAAACTCCCTTTGCTACCAGCTTTTGAACTAAGTTTTCTCAGGCTGTCATTGAGAACTGCGTATGTTGTATCAACTGTTGTGATTGCAATGATCTTTCCATACTTCAACCAGATTTTGGGAGTTTTAGGAAGCATAAGCTTTTGGCCATTAACCATATATTTTCCAGTGGAAATATACTTGAGTAGGTCCAATACTGATGCATGGACGGCTAAGTGGATTATGCTTCAAACTTTCAACATTGTTGGATTTGTATTTGGATTATTCACTCTTGTAGGATGCATTAGAGGAATAGTAACTGAAAAAATAGGCTAA 1398 0.3805 MGLESCDSADNINNPLLLNQIQSHPIKRTGTVWTAVAHIVTGVIGSGVLSLPWSIAQLGWIVGPFSILLIASSTLYSAFLLCNTYRSPNPEYGPHRSASYLDVVNFNLGVGNGRLCGLLVNICIYGFGIAFVITTSISLRAIQNSFSRHNKENETVSEFADAYYMLIFGIVQIVLSQIPNLHNINWLSVVAAITSFAYCFIGMGLSIMQIMENGYAKGSIDGISTSSGTQKLWLVSQALGDVSFSYPFSTIMMEIQDTLKTPPPENQTMKKASVISVSITTFFYLCCGCAGYAAFGDNTPGNLLTGFGSSKYYWLVDFTHVCIVVHLVGSYQVYSQPLFGNAENWFRLNYSDSEFVNHTYTLKLPLLPAFELSFLRLSLRTAYVVSTVVIAMIFPYFNQILGVLGSISFWPLTIYFPVEIYLSRSNTDAWTAKWIMLQTFNIVGFVFGLFTLVGCIRGIVTEKIG* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0334 465 PANTHER OS05G0424000 PROTEIN-RELATED 6 464 - -
Tpr4g0334 465 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 6 464 - -
Tpr4g0334 465 Pfam Transmembrane amino acid transporter protein 28 459 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0334 Tpr-Chr4 3357316 3361819 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0334 26 462 Organic Solute Cotransporters AT5G09220 45.000 1.76e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0334 K24917 - gmx:100788056 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0334 4 3357316 3361819 Tpr4g0334 4 3357316 3361819 ECH
Tpr3g3810 3 42546170 42551700 Tpr4g0334 4 3357316 3361819 PCT