Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3810 ATGAGTGCAGAATGTGCTGCAGATGGCAGCACCCCATTATTGCAAACCCAATTTCCAGATTCATATGATGTCAAAAGAACAGGAACAGTATGGACAGCAGTGGCACACATAGTGACAGGAGTAATAGGATCAGGAGTGTTGTCATTAGCATGGAGCATTGCACAAATTGGATGGATTGCAGGGCCATTAGCAATTCTTGTATTTGCGTCTGTCACTCTTCTCTCTGCTTTTCTTCTCAGTGATACTTATCGTTCTCCTGATCCTGAATTTGGACCTCGTAGAAGTTCATCCTATCTTGATGCTGTTAATCTTCATAAAGGAGAAGGAAATGGACGTTTCTGCGGTGTTTTTGTAAATATAAGCTTATATGGTTTTGGAATTGCCTACATCATTACAGCATCCATCAGCATAAGAGCAATCCAGAACTCAATCTGTTACCATGAGAAAGGGAGTGAAGAAACATGTGAATTTAATGATACATATAGCATGCTTGTTTTTGGTGCTATCCAAGTTGTTCTCTCACAGATACCAAATTTCCATAACATTGAATGGCTGTCTATTGTAGCAGCAATAATGTCATTTGCTTATGCTTTCATAGGAATGGGACTTGCAGTTGTTAAAGTCAATGAAAATGGACATTTTGAGGGTAGCATTAGAGGAATACCAACTTCCACTGGAACTGAAAAAGTATGGCTGGTTGCACAAGCACTTGGTGACATAGCCTTCTCTTATCCATTCTCAGTAATTCTTATAGAAATTCAGGACACGTTGAAATCTCCTCCGCCGGAAAACGTAACCATGAGGAGGGCCTCAACAATATCAGTGATTGTCACAACATTTTTCTACCTCTGTTGTGGCTGTGCAGGTTATGCGGCCTTTGGTAATGATACACCAGGAAATCTTTTAACAGGGTTTGCAGCTTATAAGCTTTATTGGCTTGTTGACTTTGCCAATGCTTGTATAGTTATTCACCTTGTTGGTGCATATCAGGTGTATAGCCAGCCACTTTATGCAATTGTTGAGAATTGGCTTCGATTTAAGTTCCCAGACAGTGGATTTGTGAATTACTCATACGACTTAAAACTCCCATTGCTGCCAAATTTTCAACTAAGTCCTCTAAGACTTTGTTTCCGAACTTTATATGTTGCGTCAACGACCGTGATTGCATTGCTCTTTCCATACTTCAACCAGATTTTGGGAGTTTTGGCTGGCATAATATTTTATCCATTAACCATATATTTCCCAGTGGAAATGTATATTAGTCAAGGCAACATTGAACCATGGACAAGCAAGTGGATATGGCTTAGGACTTTTAGCATTGTTGGCTTTGTGGTGGGATTGTTCACTCTCATTGGTTCCATTCAAGGGATAATTTCTGCAAAACTAGGCTGA 1392 0.3987 MSAECAADGSTPLLQTQFPDSYDVKRTGTVWTAVAHIVTGVIGSGVLSLAWSIAQIGWIAGPLAILVFASVTLLSAFLLSDTYRSPDPEFGPRRSSSYLDAVNLHKGEGNGRFCGVFVNISLYGFGIAYIITASISIRAIQNSICYHEKGSEETCEFNDTYSMLVFGAIQVVLSQIPNFHNIEWLSIVAAIMSFAYAFIGMGLAVVKVNENGHFEGSIRGIPTSTGTEKVWLVAQALGDIAFSYPFSVILIEIQDTLKSPPPENVTMRRASTISVIVTTFFYLCCGCAGYAAFGNDTPGNLLTGFAAYKLYWLVDFANACIVIHLVGAYQVYSQPLYAIVENWLRFKFPDSGFVNYSYDLKLPLLPNFQLSPLRLCFRTLYVASTTVIALLFPYFNQILGVLAGIIFYPLTIYFPVEMYISQGNIEPWTSKWIWLRTFSIVGFVVGLFTLIGSIQGIISAKLG* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3810 463 Pfam Transmembrane amino acid transporter protein 26 458 IPR013057 -
Tpr3g3810 463 PANTHER OS05G0424000 PROTEIN-RELATED 11 462 - -
Tpr3g3810 463 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 11 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3810 Tpr-Chr3 42546170 42551700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3810 18 458 Organic Solute Cotransporters AT5G09220 49.324 6.19e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3810 K24917 - gmx:100801302 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3810 3 42546170 42551700 Tpr3g3810 3 42546170 42551700 ECH
Tpr3g3810 3 42546170 42551700 Tpr4g0334 4 3357316 3361819 PCT