Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0331 ATGTATATGATGCTGTTTGGAGTTGTTCAGGTCATAATGTCATTCATACCAGATTTCCACAACATGGTATTGCTTTCAGTTGTTGCAGCTATTATGTCCTTTACATACTCTTCTATTGGACTAGGACTTGGCATCACAAAAGTTATAGAAAATGGAAGAATTATGGGGAGTGTAACCGGAGTACCAGCTTCAAATATTGCAGACAAATTATGGTTAGTCTTTCAAGCACTTGGTGATATTGCTTTTGCTTATCCATACACTGTCATCCTCCTTGAGATACAGGACACTCTAGAGTCTCCTCCAGAAGAACACAAGACAATGAAAAAGGCCTCCATGATTGCTATCTTGATTACAACATTCTTCTACCTTTGTTGTGCATGTTTTGGATATGCAGCTTTTGGAAATCAAACTCCAGGAAACCTCTTGACAGGTTTTGGATTTTATGAGCCTTATTGGCTCATTGACTTTGCTAATGCTTGCATTGTTCTTCATTTGGTTGGAGGATATCAGATTTATAGTCAACCAATATATAGTGCTGCTGATAGATGGTGTTCAAGAAAATATCCGAACAGCGGTTTCGTGAATAATTTCTACCAGGTGAAACTACCTATGTTACCGGCTTTTCAACTGAACATGTTGAGGATATGTTTTAGAACAGCTTATGTGATTTCCACAACTGGACTTGCAATAATGTTTCCATACTTCAATGAAGTTCTAGGAGTGCTAGGAGCATTAGGATTTTGGCCATTGACTATATATTTCCCAGTAGAGATGTACTTTGTGCAGAATAAAATTGAATCTTGGTCTACAAAATGGATTTTTCTTAGGATTTTTAGCTTTGTTTGTTTTTTGGTGACAGTATTGAGTCTTGTTGGATCACTTGAAGGAATCATAAGTGAGAAACTAAGCTAA 912 0.3695 MYMMLFGVVQVIMSFIPDFHNMVLLSVVAAIMSFTYSSIGLGLGITKVIENGRIMGSVTGVPASNIADKLWLVFQALGDIAFAYPYTVILLEIQDTLESPPEEHKTMKKASMIAILITTFFYLCCACFGYAAFGNQTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIYSQPIYSAADRWCSRKYPNSGFVNNFYQVKLPMLPAFQLNMLRICFRTAYVISTTGLAIMFPYFNEVLGVLGALGFWPLTIYFPVEMYFVQNKIESWSTKWIFLRIFSFVCFLVTVLSLVGSLEGIISEKLS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0331 303 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 302 - -
Tpr4g0331 303 Pfam Transmembrane amino acid transporter protein 2 298 IPR013057 -
Tpr4g0331 303 PANTHER OS05G0424000 PROTEIN-RELATED 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0331 Tpr-Chr4 3290665 3323074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0331 2 298 Organic Solute Cotransporters AT5G09220 50.667 6.80e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0331 K24917 - gmx:100781771 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0331 4 3290665 3323074 Tpr4g0331 4 3290665 3323074 ECH
Tpr3g3813 3 42597248 42599740 Tpr4g0331 4 3290665 3323074 PCT
Tpr4g0331 4 3290665 3323074 Tpr3g3814 3 42604764 42609404 PCT