Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3814 ATGGATGTCAAAAACTCTCTCCAATTAACGACTACTTCCGGTGCCTATGATGATGATGGACGTCCGAAAAGAACTGGAAATTTAAAGAGTGCTGTGGCTCATATCATAACCGCGGTTATAGGTTCTGGTGTTTTGTCTTTGGCATGGAGTGTTGCTCAATTAGGATGGATTGGAGGGCCGATTGCCTTGCTTTGTTGTGCAATAGCTACATATGTTTCTTCATGTCTTTTGGCTGATTGTTACAGAAATCCTGATTCTGTAACTGGGAAAAGAAACTACTCTTTTATGGATGCTGTTAGAGTAAATCTTGGTGAGAAAAGGACATATGCGGTTGGTTTTCTTCAAATTGTGAGCTTGTATGTGACTTGTATTGCCTATGTAATTACCACAGCAACAAGTATGAGGGCTATTATGAGATCAAACTGTTATCACGAGGAAGGGCACAATGCTCCGTGTAAATATGGTGGTAATGTGTATATGATGTTGTTTGGACTAGTTCAGGTTGTAATGTCATTTATACCAGATCTACATAGCATGGTATGGGTTTCTGTTGTTGCTACAATAATGTCCTTTGCATACTCGTCAATCGGACTTGGACTTGGGTTAGCCACAGTCATAAAAAATGGAAGATTTATGGGAAGTATGACTGGAGTACAGACTGCAACTGTTGCTGACAAAATCTGGTTAATCTTCCAGGCACTTGGTGACATTAGTTTTTCCTATCCATACTCAATGCTTTTTCTTGAGATACAGGACACTCTAGAGTCTCCTCCAGCAGAGAATAAAACGATGAAAAAGGCCTCCATGATGTCAATCTTGATTACAACATTCTTCTACCTATGTTGCGGAGGCTTTGGATATGCAGCTTTTGGAGATGCTACACCAGGAAATCTCTTGACAGGGTTTGGGTTTTACGAGCCTTTCTGGCTTATCGACTTTGCCAATGTTTGCATTATCATTCATTTGGTTGGAGGATACCAGATATACAGTCAACCAATATATAGTACTATTGATAGATGGTGTTCAAAAAGATTCCCCAAGAGTGGCTTTGTGAATGATTTTCACAAAGTGAAACTTCCTCTATTACCTGCTTTTAAGATCAATCTATTCAGGTTTTGTTGTAGAACAAGCTATGTGATTTCAACAACAGGACTTGCAATTTTATTTCCTTACTTCAACCAAATCTTAGGAGTATTAGGAGGCATAAATTTTTGGCCATTGGCGATATATTTTCCAGTTGAGATGTACTTTGTACAGAAGAAGATTGAAGCTTGGAGTACACAATGGATTGTTCTCAGATTATTTAGCTTTGCTTGCTTTCTTGTCACAGTGATGGGATTTATTGGGTCATTTGAAGGAATCATACGTGCTAAACTTAGCTAA 1383 0.3876 MDVKNSLQLTTTSGAYDDDGRPKRTGNLKSAVAHIITAVIGSGVLSLAWSVAQLGWIGGPIALLCCAIATYVSSCLLADCYRNPDSVTGKRNYSFMDAVRVNLGEKRTYAVGFLQIVSLYVTCIAYVITTATSMRAIMRSNCYHEEGHNAPCKYGGNVYMMLFGLVQVVMSFIPDLHSMVWVSVVATIMSFAYSSIGLGLGLATVIKNGRFMGSMTGVQTATVADKIWLIFQALGDISFSYPYSMLFLEIQDTLESPPAENKTMKKASMMSILITTFFYLCCGGFGYAAFGDATPGNLLTGFGFYEPFWLIDFANVCIIIHLVGGYQIYSQPIYSTIDRWCSKRFPKSGFVNDFHKVKLPLLPAFKINLFRFCCRTSYVISTTGLAILFPYFNQILGVLGGINFWPLAIYFPVEMYFVQKKIEAWSTQWIVLRLFSFACFLVTVMGFIGSFEGIIRAKLS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3814 460 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 9 458 - -
Tpr3g3814 460 PANTHER OS05G0424000 PROTEIN-RELATED 9 458 - -
Tpr3g3814 460 Pfam Transmembrane amino acid transporter protein 25 455 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3814 Tpr-Chr3 42604764 42609404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3814 16 455 Organic Solute Cotransporters AT5G09220 51.693 6.60e-180 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3814 K24917 - gmx:100818535 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0331 4 3290665 3323074 Tpr3g3814 3 42604764 42609404 PCT