Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0231 ATGGTAGCTAAAATCAAGCAAAATGTTAGTGACTCTCATAATTCAACAAAACCAGTGGTCGGAGAGATTGATACTAATTCGCCGATTCAGTCTGTTAAAGATGCGGTTTCTCTCTTTGGTGAAGTTGCTTCCTCTGCTGAAAATCCTACCATTAAGAAGTCAAAATCAAAACCTTATTCTGTTGAGAGTGTTTGGGCAAAGGAGGCACAACTTCACTTAGCACAGGTAGAGCTGAACAAATTAATGGCGCAGCTGAAAAATGCGGAAACTACCAAGGCTCAACTCCTAGCTGAGCTTGAAAAATCTAAAACAACAGTTACAGATCTGAAACAAAAACTTAAAGTTATCCGTGAATCTAGAGAGTTAGCAATTCAGGAAACAAAAGCTTTAAAATGTCAAGCGAAACAGCTAAAAGAAAAAAAACTCGGCAATCTTAATGTGACCAATTGTACTTCGAAAGAAGAGTCAGAGTCTGCAGTTCAAAGGTATAAATCTATCATTGCAGAACTTGATCTCGCAAAGCAAGAACTTAGGAAGATTCGCCAGGAGTGTAAGGAATCGATGGAAGTGAAAGTTTCTGCCTTCAAGCGAGCAGAAGAAGCTAAAGATGCAATGGCAGCATACACAGATCGAGCGTATGAGCTTTCGAAAGAAATTTTAGCTGTACAAGAATCAATTCAGCAATTGAAGCTTTCATCTGTCGAAGCCAATCAACAGAAAGAAGAGATATTAGTTGAGAAAAATGTTCTGAGCCAATCATATAAAGCCACCCTTGAAGAATCAAAAAAGAAATTGCTCGCTTTAAAGAAGGATTTTGGTCCGGGACTCGCCGAAAATCTTGAATTGAAGTTTAATGAGACAATGAACGAAATATCGGCTCTTCAAAAGGAAATAGAAAATAAAAAGAAATCAGACATTGAATCGCTGAAAAGTGTCACTTTTGTGCTTGATGATGCTAAGCAATCATTGCAGAAAATATCAGAAGAGGAAAACTCTATTAGAAGCTTCGTGGAAGCTCTTAGGGTGGAATTGGAGAATGTAAAAAGAGAGCACTCAGTATTGAAGAAGAAAGAATGTGAAACTGAATCCATTGTTAGGAATCTGCGTGGCGAGCTTCATAAAGGCGAGTTGGAGCTTGAAGTCTACTTGGCAGAAGAATCTAAAGTTAGGGGTTCATCTAAGAAAATGATTGGGATGCTGAACCAGATGTCCAGTGAAACTGAAAATGCACGGCGGGAGGCTGAAGATATGAAGATCAAGGCAATAGAATTGAAAGTGGAAGCTGAAGTCACCAAACGTGCATTAGAAGATGCAGAAATGGAGCTTAAAGTAGCATTAGAAGAAGCAGAAGCGGCGAAAGCAGAAGAGGCGAGTATACTTGATCAAATTAGAGACTTGTCTGAAAAGACAAATGCTGATCACGCCTCAACGTCTGAATCTGGTGCGAGAATCACAATCTCTTGGGAGGAATTCGAGTGCTTAAACCGCATGATTGAGGAGTGTGATAGACTAGCGAGCGTAAAAGTGGCTGCTGCGACAGCGCATATTGAAGCTGCGAAGGTTAGTGAAAATGAGGCTTTCAAAAAGTTAGAGGTAACACAGAAGGAAATCGAGGAGATAAAGAAAGCAACACATGAGGCCTTGAAACAGGCCGAGATTGCTGGAAGAGCAAAAATGGCTGTGGAGACTGAGCTTAAAAGATTGCGCGAGAGACGGCATAAGAAAGCAGCAGAAACTGCAGCTCGAGTATTGGCCGAAAAACAAATGTCATCGCCGTCTTCATCATCATCACAGCGTTACAGGTTTCAACAACAGAATTCATTTCGGAAAAACATGGAGGTGAAAAAGTTGGAAAAAGGGAAGTTTTCGGTTTCAAAGAAAGTTCTATCGCAAAATATTAGTGGCATCTTTCACAGGAAAAAGAGCATGCAGGTTGAGAAAGGATTTCCTTCTTACCTTCCAGGTGAGAATCCTTTGTGA 1980 0.403 MVAKIKQNVSDSHNSTKPVVGEIDTNSPIQSVKDAVSLFGEVASSAENPTIKKSKSKPYSVESVWAKEAQLHLAQVELNKLMAQLKNAETTKAQLLAELEKSKTTVTDLKQKLKVIRESRELAIQETKALKCQAKQLKEKKLGNLNVTNCTSKEESESAVQRYKSIIAELDLAKQELRKIRQECKESMEVKVSAFKRAEEAKDAMAAYTDRAYELSKEILAVQESIQQLKLSSVEANQQKEEILVEKNVLSQSYKATLEESKKKLLALKKDFGPGLAENLELKFNETMNEISALQKEIENKKKSDIESLKSVTFVLDDAKQSLQKISEEENSIRSFVEALRVELENVKREHSVLKKKECETESIVRNLRGELHKGELELEVYLAEESKVRGSSKKMIGMLNQMSSETENARREAEDMKIKAIELKVEAEVTKRALEDAEMELKVALEEAEAAKAEEASILDQIRDLSEKTNADHASTSESGARITISWEEFECLNRMIEECDRLASVKVAAATAHIEAAKVSENEAFKKLEVTQKEIEEIKKATHEALKQAEIAGRAKMAVETELKRLRERRHKKAAETAARVLAEKQMSSPSSSSSQRYRFQQQNSFRKNMEVKKLEKGKFSVSKKVLSQNISGIFHRKKSMQVEKGFPSYLPGENPL* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0231 659 MobiDBLite consensus disorder prediction 586 604 - -
Tpr4g0231 659 Coils Coil 198 218 - -
Tpr4g0231 659 Coils Coil 71 112 - -
Tpr4g0231 659 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 4 635 - -
Tpr4g0231 659 Coils Coil 277 304 - -
Tpr4g0231 659 Coils Coil 251 271 - -
Tpr4g0231 659 Pfam Weak chloroplast movement under blue light 22 574 IPR008545 -
Tpr4g0231 659 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 4 635 - -
Tpr4g0231 659 MobiDBLite consensus disorder prediction 1 24 - -
Tpr4g0231 659 Coils Coil 163 190 - -
Tpr4g0231 659 Coils Coil 400 469 - -
Tpr4g0231 659 Coils Coil 337 357 - -
Tpr4g0231 659 Coils Coil 523 578 - -
Tpr4g0231 659 MobiDBLite consensus disorder prediction 584 604 - -
Tpr4g0231 659 Coils Coil 120 140 - -
Tpr4g0231 659 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0231 Tpr-Chr4 2364043 2367689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0231 - - cam:101515730 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0231 4 2364043 2367689 Tpr4g0231 4 2364043 2367689 ECH
Tpr3g3852 3 42969095 42974141 Tpr4g0231 4 2364043 2367689 PCT