Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3852 ATGGTCGCAAAAATTCGGCAAAGTGTTACTGACTCTCCAACGCCGAGTCCAAAGCCAGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTGTCTCTATTTGGTGAAGGTGCTTTCTCTGGGGAAAGACCTATCCTTAAGAAGCCAAAAGCTTATTCTGCCGAGAGAGTTTTGGCTAAGGAGACGCAACTTCATGTAGCCGAAAAAGAGCTGAACAAGTTGAGGGAACAAGTAAAGAACGCTGAAACTACCAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTCAAAGGACTGTTGATGATTTGACACAAAAGCTAAAACTTATTACTGAGTCTAGGGAGTTGGCTATCACGGCAACAGAAGCTGCAAAATCTCAGGCAACACAAAAGTATGGTGACTCGGATGGAATCAATGGGACCTGGAAAGAAGAGTTAGAAACTGCAGTTAAAAGGTATGCATCTATCATGACAGAACTCGATGCTGCTAAGCAAGATCTGAGGAAAACTCGTCAGGAATATGATTCATCATCAGGTGCAAGAGTGTTGGCTGTCAAGCAAACGGAAGAAGCTGAACATGCAATGAAGGAAAACACGGAAAGAATATCTGAGCTATACAAAGAAATTTTATCTGTAAAAGAGTCGATTGAGCAAGAAAAGCTTGCATCGGTGGAAGCACAGCGGCAGCAAGCATTGACATTATCTGAGAAAGACGCTCTTAGACAATCATACAAAGCTACTCTTGAACAATCCAAAAAGAAATTACTTGCTTTAAAAAAGGAATTCAATCCTGAGCTCACAAAAAATCTTGAAGTGCAGTTGGCCGAGACAATGAGTGAAATTGCGACTTTGCAATCAGAAATGGAAAACAAAAGGTCGTCCGACTTGGACTCTGTAAAAACCGTTACTTCGGAGCTTGACGGTGCGAAAGAATCACTGCATAAAGTAGTAGACGAGGAAAACTCTCTTAGAATCTTGGTAGAGACTCTGAAGGTGGAACTAGAGAATGTAAAGAAAGAACATGCTGAATTGAAGGAAAAAGAGTCCGAAACCGAATCCATCGTTGGGAATCTACATGTCAAACTCCGCAAAAGCAAGGCTGAGCTTGAAGCCTGCTCTGCTGAAGAATCTAAGGTTAGAGGTGCATCCGAGGAAATGATCTTGACACTGAGTCAGCTGACATCTGAAACTGAGGAAGCACGACGGGAAGCAGAAGATATGAGGAACAAAACAGCCGAGTTAAAGAAGGAAGCCGAAGCTACCAAGCTTGCATTAGAAGATGCAGAGAAGAAGCTTAAAGAAGCAATGGAAGAAGCAGAAGCAGCAAAATTGGCTGAAGCTAGTGCTGTCGAGCAGATTACAGTGCTAACCGAAAGGACAAGTGCTGCGCGTGCATCAACGTCATCGGAATCTGGTGCTGCAATTACACTCTCAACGGAGGAGTTCGAGTCACTAAATCGGAAAGTCGAGGAGTCTGATAAATTAGCAGACATGAAAGTGGATGCGGCCAAAGCACAGGTTGAAGCTGTGAAAGCTAGCGAAAATGAAATTTTGAAAAAGTTGGAAGCAACTCAAAAGGAGATTGAGGATATGAAGACTGCAACACAAGAGGCCTTGAAAAAGGCCGAGATGGCCGAAGCGGCAAAGAGGGCAGTAGAGAGTGAGCTTCGAAGGTGGCGCGAGAGGGAACAGAAAAAGGCAGCCGAAGCTGCAGCTCGGATACTGGCCGAAACACAGATATCATTGTCATCAGAATCATCTCCTCAGCATTATAGGATTCAAAAGCAGAATGTCCCTCCTCCTCATACAACAGTGGAAGTGAGGAAGTTAGATAAAGAGAAGATATCGGTTTCGAAGAAAACAGTGTTGCCTAATATTAGTGGTATCTTTCAGAGGAAGAAAAGCAATGTTGATGGTGGATCTGTTTCTTATTTGCCTGGTGAGAATCGTGTATAG 1971 0.4373 MVAKIRQSVTDSPTPSPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGERPILKKPKAYSAERVLAKETQLHVAEKELNKLREQVKNAETTKAQALVELERAQRTVDDLTQKLKLITESRELAITATEAAKSQATQKYGDSDGINGTWKEELETAVKRYASIMTELDAAKQDLRKTRQEYDSSSGARVLAVKQTEEAEHAMKENTERISELYKEILSVKESIEQEKLASVEAQRQQALTLSEKDALRQSYKATLEQSKKKLLALKKEFNPELTKNLEVQLAETMSEIATLQSEMENKRSSDLDSVKTVTSELDGAKESLHKVVDEENSLRILVETLKVELENVKKEHAELKEKESETESIVGNLHVKLRKSKAELEACSAEESKVRGASEEMILTLSQLTSETEEARREAEDMRNKTAELKKEAEATKLALEDAEKKLKEAMEEAEAAKLAEASAVEQITVLTERTSAARASTSSESGAAITLSTEEFESLNRKVEESDKLADMKVDAAKAQVEAVKASENEILKKLEATQKEIEDMKTATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAAARILAETQISLSSESSPQHYRIQKQNVPPPHTTVEVRKLDKEKISVSKKTVLPNISGIFQRKKSNVDGGSVSYLPGENRV* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3852 656 Coils Coil 246 266 - -
Tpr3g3852 656 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 3 633 - -
Tpr3g3852 656 Coils Coil 151 178 - -
Tpr3g3852 656 Coils Coil 395 457 - -
Tpr3g3852 656 Coils Coil 325 359 - -
Tpr3g3852 656 Coils Coil 509 567 - -
Tpr3g3852 656 Pfam Weak chloroplast movement under blue light 23 570 IPR008545 -
Tpr3g3852 656 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 633 - -
Tpr3g3852 656 Coils Coil 63 118 - -
Tpr3g3852 656 Coils Coil 193 213 - -
Tpr3g3852 656 Coils Coil 272 299 - -
Tpr3g3852 656 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3852 Tpr-Chr3 42969095 42974141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3852 - - gmx:100794569 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3852 3 42969095 42974141 Tpr4g0231 4 2364043 2367689 PCT