Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0205 ATGATGAGAGGAAAATTCATCAATTTCTTTGTCAATCCAACACCAAAAGAATGGTCCCTATTTTCTCTTAGACACCACAAATCTCAATCTCATCAATTCATGTCTGTTGTTTCTTCTAATCTTGTTACAAATTCAAACAATCTTTTACCTCATGATGATCCTTCATGTGATAAAATCTTCAAACCAAGTTTCAATATGAAATATGGAGTCAACACTTTACATACTAGTAGTTCAGTTGTGGAACAATCTGAAAGAGATGTTGTTGAAAATTTTGTTTGGTTGAAGATGCAAGAAGAAGCTAAAATTGATGTCACTGTTGAACCAATATTGTCTAGTTACTATCATGTTTCAATCTTGTCTCAAAAATCATTGGAAACTGCTTTGGCCAATCATCTTTCAGTCAAACTAAGCAGTGTAAGTCTTCCTAGTACAACACTTTCTGATCTTTTTGTTGGTGTTTTTGAATCTGATAAAGAAATTATGGATGCTATGAAAAATGATTTGATAGCAGTTAAGGAAAGAGATCCTGCTTGTATAAGTCATGTGCATTGTTTCTTGAATTTCAAAGGCTTTTTAGCATGTCAAGCTCATAGGGTAGCTCATAATTTATGGTCAAATGGAAGGAAAGTTTTAGCTGTTATGATTCAGAATCGAGTTTCAGAAGTTTTTGGAGTTGATATTCATCCGGGAGCTAAGATCGGAAGTGGGATTTTGCTCGATCACGCAACGGGGATTGTGGTCGGTGAAACAGCTATTATTGGTAATGATGTTTCAATTTTGCACGGTGTGACTTTAGGAGGGACCGGTAAGGCTCATGGTGACAGGCATCCGAAGATTGGTGATGGAGTGTTGATAGGTGCCGGAACTTGTATCTTAGGGAATATTAAGATTGGTGATGGCGCGAAAATTGGTGCTGGTTCGGTCGTGATTATGGAAGTTCCTCCAAGGACAACGGTCGTTGGGAATCCGGCTAAATTGATTGGAGGGAAGAATAATCCTATTAAACTTGATAAAATTCCTAGTCACACTATGGATCATATTTCACATGTTTCTGAATTTTATGATTATGTTATCTAG 1077 0.3658 MMRGKFINFFVNPTPKEWSLFSLRHHKSQSHQFMSVVSSNLVTNSNNLLPHDDPSCDKIFKPSFNMKYGVNTLHTSSSVVEQSERDVVENFVWLKMQEEAKIDVTVEPILSSYYHVSILSQKSLETALANHLSVKLSSVSLPSTTLSDLFVGVFESDKEIMDAMKNDLIAVKERDPACISHVHCFLNFKGFLACQAHRVAHNLWSNGRKVLAVMIQNRVSEVFGVDIHPGAKIGSGILLDHATGIVVGETAIIGNDVSILHGVTLGGTGKAHGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVIMEVPPRTTVVGNPAKLIGGKNNPIKLDKIPSHTMDHISHVSEFYDYVI* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0205 358 Pfam Serine acetyltransferase, N-terminal 92 196 IPR010493 GO:0005737|GO:0006535|GO:0009001
Tpr4g0205 358 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 285 313 IPR018357 GO:0016740
Tpr4g0205 358 SUPERFAMILY Trimeric LpxA-like enzymes 96 328 IPR011004 -
Tpr4g0205 358 CDD LbH_SAT 223 323 IPR045304 -
Tpr4g0205 358 PANTHER SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC 58 358 - -
Tpr4g0205 358 SMART SATase_N_2_a 92 196 IPR010493 GO:0005737|GO:0006535|GO:0009001
Tpr4g0205 358 Gene3D Hexapeptide repeat proteins 226 347 - -
Tpr4g0205 358 PANTHER SERINE ACETYLTRANSFERASE 58 358 - -
Tpr4g0205 358 Pfam Bacterial transferase hexapeptide (six repeats) 276 309 IPR001451 -
Tpr4g0205 358 TIGRFAM cysE: serine O-acetyltransferase 165 325 IPR005881 GO:0005737|GO:0006535|GO:0009001
Tpr4g0205 358 Gene3D serine acetyltransferase, domain 1 73 225 IPR042122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0205 Tpr-Chr4 2141279 2142663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0205 64 357 Miscellaneous Gene Families AT2G17640 50.000 1.25e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0205 K00640 - gmx:100820316 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0205 4 2141279 2142663 Tpr4g0205 4 2141279 2142663 ECH
Tpr3g3899 3 43459124 43460968 Tpr4g0205 4 2141279 2142663 PCT