Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0147 ATGTCTTCAACATCATCATCATCTATCAGAAACCTTCTTCCTAGATCATTTTCTTCCAAGCGAAAATCAACTTCATCAAACCCTAAATTCCCAAATTCAGATGCCGAAAACACTCCCCCTACTGATCCCAACATTATTCAGATCAACTCTCACCAAGCATTACCTATCACAGCCAAACAATCACACTCTGAAACCCCAATTTCAACCCAATCAAATCCTCCTCTTGAATCAGACCCATCAGTGAAAGTTGTAGTACGAATTAGACCTACAAGTAACATTGGAATAGGAGATCAAGCTGTTAAGAAAGTTTCTTCTGATATCTTGTGTGTTGGAGATAGACAATTTAGATTTGATTCAATTTTTGACTCCAAAACAAGCCAGGAAGATATTTTTCAATCAGTCGGTGTTCCTTTGGTTAAAAATGCTTTAGCTGGTTACAACACTTCAATTCTGTCATATGGCCAGTCTGGAAGTGGAAAGACTTATACAATGTGGGGTCCTCCAAGTGCTATGTTTGAGGAGCACTCGCCGCAAAGTCACAAAGGAATTGTACCTCGGATCTTCCAAATGTTGTTTTCTGAGCTTGAAAAAGAGCAGCGCATGTCTGAGGGGAAACAGTTCAACTATCAGTGTCGATGTTGTTTTCTTGAGATATACAATGAACAAGTTGGGGATTTACTTGATCCAACCCAGCGGAACCTTGAGATGAAGGATGACTCCAAAAATGCAATGTCCTTGGAGAATCTGAGTGAGGAATATGTTACTAGCTATGATGATGTGACGCAAATTCTGATCAAGGGCCTCTCTAGCAGAAAAGTTGGAGCAACAACCTTAAATTCTAAGAGCTCTAGATCACACATCATTTTCACTTTAGTGATCGAGTCTTGGTGTAAGGGAACTTCAACAAATGGTTTCAGCAGTTCAAAAAGTAGCAGAATTAGCCTTATTGATCTTGCTGGTCAGGACAGGAACAAAGTTGACGGTGCAGGCAGACAATGTCTAAGGGAAACCAAAAGTGTAAAGAAGTCTTTATCTCAGCTTGGGCACTTAGTAGATGCCTTAACTAAAGAAACTTGCTCAGGAAAAGAAGTTTCAAACAGAAACTCCTGTTTAACACGTTTACTACATGAGTCACTTGGTGGAAATGCCAAACTCTCAGTAATCTGTTCCATCTACCCAGATATCAAGAATAATGGTGAAACACTGCGCACACTCAGATTTGGACAACGAGTAAGATCTATTCGAAATGAGCCTGTTATCAATGAAATAAAGGAGGATGATGTTAACGATTTGAGTGATCAAATCCGACAGCTGAAGGAAGAACTTATTAGAGCAAAGGCTGATGTTCGTAGCTCAGATGGGAATAAAAAAGGATATCTCCATGTACAGAATGTACGGGAAAGCCTGAATAATTTGAGGGTCAGCTTAAACCGCTCTCTACTCATACCTAACATCGATAATGATACCGATGATGAGGTGAATGTGGACGAGGAGGACATAGAGGAATTACGCCAGCAGATTGATGAATTTTATAGTTCATGTGAAGGAAATCCTATAGACATATCTGTCAGTGAAGATTGTGTTCAGTATTATTCTGTTGAGGAAAGTTGCGAGGCAGATATGACCTGTGGTGATGAAATTGAAAAAGGAGAAGTATGTTCGGGAGAAGCATTTAACAAGCTTTGTCATGAGGACAGTTTTGCATCAGATAACACCTTGTATGCCTCAGCCAACGACACCTCAAGGGCCATTAGATCTTCATTCAGAGATAGCATTTCAATCAGCTCATCCTGTCGGTCTCCCATGCTTCTTGAGGAACCACAACTTTCTGAGTCTCCAAAAATCAGAAATATACAGAGGAAGAGTGTGGCCTTTTCATCTTGTCTTGGAAGTTCAAATAAAGTGGAAGAAGAAAATTCAAATTCCAATAAGGATTTGTTGGGTAAGTCATTTACAAAGGATGAAGTTGTGCGATCCTCACTAAGATCAAGCAAGGTTTTTCCAGGTCCCACTGAGTCCTTGGCAGCAAGCCTTAAGAGGGGATTACAGATAATTGATTCTCATCAGCGGAACTCATCATTGAACAAATCATCAACTTCCTTCTCTTTTGGGCGTGGAAGTTTTGGCGATTCTTGTGATCAAACAATGCAGCAGAAGAAATATTCTATTGATGAAAGAACTGCCACTTTGCTTTGTGGTTATTGCCGTAAAATAATAACTGATCAGGATTCCAGAGAGGTCCGAAATAGTTTAAAGTCATGCATTGACACATCTGAAGCAAAAAATTCGGATGGACTGAAAGATAAGACTCCAAAAGATTTGGAGAGTATAACAGAAAAAGAAATCACCAGAGAAGAGGAGCTTGAGAATATTTGCAAGGAGCAAGCAGCTAGAATTGATGAACTAAATCAATTGGTGGAGAAACTTAAAGGAGAAAAAGAACTGAACTCCATCACCGTGTATCGAGAAAGCAACAAGCAGACTGAACATGCAGAAGATGACAATAACTCGATGAAAGATGAATACAAGCTCTTGAAAGGAACATCCTCAGATAGTCATTTAGAAGAAAAATGTGAAATTAAAGAAGTCCGTGAAGAATTAACTCAAAGAAGCATCTCTTTTGATGCTACTGAGAAGGAAGAACTTCTCAAGGAAATTCAGAATCTGAGAAGCAAGCTACAGTTATACAGCGATGCACCAGTTAAAATGTCCACTGATAAACTGAGATCTTCATTAATATCAAGATCCATTCAATTGCGTAAAAGTGGTGTGTTTTCTCCTAATAATAATAATAGTGCAGAAGAGCTAGAGAAAGAAAGGGAGAGATGGACAGAAATGGAAAGTGAGTGGATTTGTCTCACTGATGAACTAAGAGTTGATCTCGTGGCTAACCGGCAGCGGGCAGAGAGGGTGGAGCAGGAATTGAAGTTAGAGAAGATGTGCACTGAGGAGTTAGATGATGCACTCAAAAGATCAGTTCTTGGACATGCTAGGATGGTAGAACACTATGTTGACCTCCAAGAAAAGTATAACGACTTGGTTGCAAAACACAATGCTATAATGCATGGCATAGCCGAGGTGAAGAAAGCAGCAGCTAAGGCCGGGAAAAGGGGTCATGCCCGCTTTGCCAAATCTCTTGCCGCCGAGCTTTCTGCATTGAGGGTGGAGAGGGAAAGGGAAGCAAAATTCTTGAAGAAGGAGAACTCAAGTCTCAAAGCTCAACTAAGAGACACTGCAGAAGCTGTTCATGCTGCTGGAGAATTACTTGTCAGACTCAGAGAAGCCGAACATGCAGCTTCTGTTGCAGAGGATAATTTTACAAAAGTTCAACTGGATAATGAAAAGCTTAAAAAGCAAATGGATAAGCTCAAAAGAAAGCACAAGATGGAGTTGATTACCATGAAGCAGTACCTTGCAGAGAGCAAATTACCAGAGTCGGCACTGAAACCGCTATACCGAGAGGATTCCGATGTGGCACACAACAATGCAAGTCCTCGCTATCAGGATGATGATCAGTCATGGAGAGCTGAATTTGGAGCAATCTATCAAGAGCATATTTGA 3561 0.4041 MSSTSSSSIRNLLPRSFSSKRKSTSSNPKFPNSDAENTPPTDPNIIQINSHQALPITAKQSHSETPISTQSNPPLESDPSVKVVVRIRPTSNIGIGDQAVKKVSSDILCVGDRQFRFDSIFDSKTSQEDIFQSVGVPLVKNALAGYNTSILSYGQSGSGKTYTMWGPPSAMFEEHSPQSHKGIVPRIFQMLFSELEKEQRMSEGKQFNYQCRCCFLEIYNEQVGDLLDPTQRNLEMKDDSKNAMSLENLSEEYVTSYDDVTQILIKGLSSRKVGATTLNSKSSRSHIIFTLVIESWCKGTSTNGFSSSKSSRISLIDLAGQDRNKVDGAGRQCLRETKSVKKSLSQLGHLVDALTKETCSGKEVSNRNSCLTRLLHESLGGNAKLSVICSIYPDIKNNGETLRTLRFGQRVRSIRNEPVINEIKEDDVNDLSDQIRQLKEELIRAKADVRSSDGNKKGYLHVQNVRESLNNLRVSLNRSLLIPNIDNDTDDEVNVDEEDIEELRQQIDEFYSSCEGNPIDISVSEDCVQYYSVEESCEADMTCGDEIEKGEVCSGEAFNKLCHEDSFASDNTLYASANDTSRAIRSSFRDSISISSSCRSPMLLEEPQLSESPKIRNIQRKSVAFSSCLGSSNKVEEENSNSNKDLLGKSFTKDEVVRSSLRSSKVFPGPTESLAASLKRGLQIIDSHQRNSSLNKSSTSFSFGRGSFGDSCDQTMQQKKYSIDERTATLLCGYCRKIITDQDSREVRNSLKSCIDTSEAKNSDGLKDKTPKDLESITEKEITREEELENICKEQAARIDELNQLVEKLKGEKELNSITVYRESNKQTEHAEDDNNSMKDEYKLLKGTSSDSHLEEKCEIKEVREELTQRSISFDATEKEELLKEIQNLRSKLQLYSDAPVKMSTDKLRSSLISRSIQLRKSGVFSPNNNNSAEELEKERERWTEMESEWICLTDELRVDLVANRQRAERVEQELKLEKMCTEELDDALKRSVLGHARMVEHYVDLQEKYNDLVAKHNAIMHGIAEVKKAAAKAGKRGHARFAKSLAAELSALRVEREREAKFLKKENSSLKAQLRDTAEAVHAAGELLVRLREAEHAASVAEDNFTKVQLDNEKLKKQMDKLKRKHKMELITMKQYLAESKLPESALKPLYREDSDVAHNNASPRYQDDDQSWRAEFGAIYQEHI* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0147 1186 Coils Coil 1106 1133 - -
Tpr4g0147 1186 Coils Coil 821 841 - -
Tpr4g0147 1186 Pfam Kinesin motor domain 110 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0147 1186 Coils Coil 421 455 - -
Tpr4g0147 1186 MobiDBLite consensus disorder prediction 1 42 - -
Tpr4g0147 1186 PRINTS Kinesin heavy chain signature 145 166 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0147 1186 PRINTS Kinesin heavy chain signature 276 293 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0147 1186 PRINTS Kinesin heavy chain signature 312 330 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0147 1186 PRINTS Kinesin heavy chain signature 364 385 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0147 1186 ProSiteProfiles Kinesin motor domain profile. 80 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0147 1186 Coils Coil 1047 1081 - -
Tpr4g0147 1186 SMART kinesin_4 78 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g0147 1186 MobiDBLite consensus disorder prediction 57 80 - -
Tpr4g0147 1186 MobiDBLite consensus disorder prediction 57 77 - -
Tpr4g0147 1186 PANTHER CENTROMERE PROTEIN E 57 1186 - -
Tpr4g0147 1186 PANTHER KINESIN-LIKE PROTEIN KIN-12F 57 1186 - -
Tpr4g0147 1186 Coils Coil 872 899 - -
Tpr4g0147 1186 Gene3D Kinesin motor domain 76 456 IPR036961 -
Tpr4g0147 1186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 446 IPR027417 -
Tpr4g0147 1186 Coils Coil 785 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0147 Tpr-Chr4 1662831 1668565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0147 74 450 Miscellaneous Gene Families AT5G06670 32.987 4.39e-51 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0147 K10400 - gmx:100806960 1647.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0147 4 1662831 1668565 Tpr4g0147 4 1662831 1668565 ECH
Tpr3g4056 3 45124805 45130965 Tpr4g0147 4 1662831 1668565 PCT