Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4056 ATGAACATGAAGCAAAAGAACAACAACAACGTAGATAATGGTTTCTTCGGAACCTTCACTTCCACTTCAATCAAAAACCTTCTTCCAATTTCATCCTTCCGCAAAACCATTTCTTCAAACCCAAAATCCAATCTTGAAAACATTCCCCCAATCAATTCAAACATACCCAAAATTCAACCAAACCCTAAAACCCCATTTTCTCATAACAACCCTCATGTCAAGGTTGTGGTGAGAATTAGACCTAAAGAGGGTGATTGTGTAATTAACAAGGTTTCTTCTGATGCTTTGTGTGTTGGTGATAGACAGTTCAATTTTGATCAAGTTTTTTATGCTGACTCAAATCAGGAAGATGTTTTTCAGTCAGTGGGTGTTCCCTTGGTTCGAAATGCTTTAGCTGGTTACAATACTTCAATTCTGTCATATGGCCAGTCTGGAAGCGGAAAGACTTATACAATGTGGGGTCCGCCGAGTGCCATGGCTGAGGATCCTTCGCGTAATAGCCACGAGGGAATTGCTCCTCGGATCTTCCAATTGTTATTCTCTGAGCTTGAAAGAGAGAGACTTGTGTCGGACCAGAAGCAGTTCACATATAAATGCCGTTGTTCTTTTCTTGAGATATATAACGATCAAATTGGGAATTTACTCAATCCAAGTCAGAGGAATCTTGAGATGAAGGATGACTCCAAAAATGGACTATATGTTGAGAATCTGATTGAGGAATATGTCACATGCTACGATGACGTGGCACAAATTCTGATTAAGGGACTTTCAAGCAGAAAAATTGGAGCAACAAGCTTAAATTTTAATAGCTCTAGATCACATATCATTTTCACTTTTGTCATTGAGTCTTTGTGTAAGGGGACCACAAAGGGTTTCAGTAGTTTAAAAGCTAGCAGAATCAGCCTTATTGATCTTGCCGGATTGGATGTGGGTAGTGTTGACGATGGAAGAAGACATGTACAGAAATCATTATCTCAGCTTGGGCATTTAGTGGATGCTCTTGCTGACAAATCCCTGTCTGGAGAAAATGAAGAAATTCCACCAAGAAACTCATCTTTAACTCAATTGCTACAAGAATCACTTGGTGGAAATGCCAAACTCTCAGCAATATGTTCCATCTCCCCTGATAACAAGAACATTGATGAAACACTCTGCACACTCAGATTTGGGGAGAAAGTAAGATCCGTCAGAAACAATCCAATTATTAATGTTATAAAGGAGGCCGACGATTTGAGTGGTAAAATCCGACACTTGAAGGAAGAACTTGTTAGAGTAAAGGCTGGTGATGCTCATAGCTCAGTTGGGGGTAACAATGGATGCTTCCAAGGACATAATGTGCGGGAAAGCCTTAATCAGTTGAGAGTCAACTTAAACCGTTCTCTACTCCTATCTAACTTAGATAATAATACCGATAAAGCTGTAAATGTCGGCGAGGATGACATAAGGCAATTACGCCAGCAAATTGATGAATATAGTTCATGTGAAGGGAATCTGAAATACATTTCTGTCAGTGAAGATCATGTCCAGTTTGATTCTTTTGATGAAAATTATGATGATGCAGACACAACCATAGGTGAAGAAAATTCTGTTGGTGATAGCATTTCAGTCATTTCATGCAGCAAATCTCCAATACTTAACGGACCAGAGTTGTCCGAGTCTCCAAAATTCAGCAAGAACCAAAGGAAAAGCGTGGCTTTTTCATCGAGTTATCTAGGAAGTAGGAACAACATTTCAGATAGTTCAACTTTTGGGAATGACCTTTCAGGAAAATCAGTTAAACAGGGTGAGCATATGCAGACTTCATTACAGTTAGGCAAAGTTGAGTCCTTGGCAGAAAGTCTGCAGAAGGGATTACAGATAATTGATTATCACCAACAGAACTCCGCATTGAACAAATCTTCAAGTTCCTTCTCCTTTGGCCGTTTAACTTTGACACCTTGTCCAGAAATCAACAAGGTTGAACCTTATGATCAAACAATACAGCATAACATTTCTAGTGATGAAGTCACTTCCTCATTCCTTTGTGCAACTTGTTGCACAGATTTAACAGATGAAGCTCCAAAGCATTTGGAAAATGTATTGGAAAAAAGCAAGATGAGAGAGAAGGAGCTTGAGAATGTTTGTAAGGAGCAAGCAGCAAGAATTGAGCAACTAAATCAATTGGTTGAGAAATTGAAAGGAGAGAATAATCTGAACTCTGTCTCAGGCACTTCCGCAAATGGTGACACACCATATATCATAGAGGAAAAATGTGAAATTAAAGAAGTCCAAGAAGAGTTAGCTCAGAGAGACATCTTTTCTGATTCAACTGAGAAGGAGTCACTTCTCTTGGAAATTCAGAGTCTAAGGAGAAAGCTCCAATTATATAATGATGGATCAGTCAAAATGTCTACAGACAAACTTCGATCTTCTTTGATGTCTAGATCCATGCAACTGCAAAAAAGTGGTATATTTTCTCGTGATAGTAGTAATGAGGATCTGGAAAATGAAAGACAGAGATGGACAGAAATGGAAAGTGATTGGATTTGCCTTACTGATGAACTTAGAGCTGACCTTGAGTCGTACCGCCGGCGTGCAGAGAAGTTGGAAACTGAATTGGATTTAGAGAAGAAAGGCACAGAAGAGATGGATGATGCACTAAAAAGAGCTGTTAATGGTCATGCTAGAATGGTAGAACACTATTCCGATCTCCAAGAAAAATACAACAACTTGGCTTGTAAGCATGATGCTATGATGGAAGGGATAGCAGAGGTGAAGAAGGCAGTGGCAAAAGCCTCGAAAAAAGGTAAAGCACGCTTTGCCAAATCTCTTTCTGCTGAGCTTTCTGCCTTGAGGTTGGAAAGGGAAAGGGAGTCGAAATTATTGAAAAAGGAGAACCAGTGTTTGAAAATTCAACTTCGAGACACTGCTGAGGCTGTTCAAGCTGCCGGGGAACTACTTGTTAGACTAAGAGAAGCTGAACAAGCAGCATCTGTTGCAGAGGAAAACTTTGCAAATGTGCGACGAGATAATGAAGAGTTAAAAATGCAAGTGGAGAAGCTGAATAGAAAACACAAGACAGAGATTAATACCATGAAGCAGTACCTTACAGAGAGCAAATTGCCAGAGTCTGCATTGAAGCCACTGTATCAAGAGAATTCTGACACAACACACAATGATACAACTTCTTCCTATGCTTATGATGATCAAGCATGGAGAGCAGAATTCGGAGCTATATATCAGGACCATTACTAA 3234 0.3964 MNMKQKNNNNVDNGFFGTFTSTSIKNLLPISSFRKTISSNPKSNLENIPPINSNIPKIQPNPKTPFSHNNPHVKVVVRIRPKEGDCVINKVSSDALCVGDRQFNFDQVFYADSNQEDVFQSVGVPLVRNALAGYNTSILSYGQSGSGKTYTMWGPPSAMAEDPSRNSHEGIAPRIFQLLFSELERERLVSDQKQFTYKCRCSFLEIYNDQIGNLLNPSQRNLEMKDDSKNGLYVENLIEEYVTCYDDVAQILIKGLSSRKIGATSLNFNSSRSHIIFTFVIESLCKGTTKGFSSLKASRISLIDLAGLDVGSVDDGRRHVQKSLSQLGHLVDALADKSLSGENEEIPPRNSSLTQLLQESLGGNAKLSAICSISPDNKNIDETLCTLRFGEKVRSVRNNPIINVIKEADDLSGKIRHLKEELVRVKAGDAHSSVGGNNGCFQGHNVRESLNQLRVNLNRSLLLSNLDNNTDKAVNVGEDDIRQLRQQIDEYSSCEGNLKYISVSEDHVQFDSFDENYDDADTTIGEENSVGDSISVISCSKSPILNGPELSESPKFSKNQRKSVAFSSSYLGSRNNISDSSTFGNDLSGKSVKQGEHMQTSLQLGKVESLAESLQKGLQIIDYHQQNSALNKSSSSFSFGRLTLTPCPEINKVEPYDQTIQHNISSDEVTSSFLCATCCTDLTDEAPKHLENVLEKSKMREKELENVCKEQAARIEQLNQLVEKLKGENNLNSVSGTSANGDTPYIIEEKCEIKEVQEELAQRDIFSDSTEKESLLLEIQSLRRKLQLYNDGSVKMSTDKLRSSLMSRSMQLQKSGIFSRDSSNEDLENERQRWTEMESDWICLTDELRADLESYRRRAEKLETELDLEKKGTEEMDDALKRAVNGHARMVEHYSDLQEKYNNLACKHDAMMEGIAEVKKAVAKASKKGKARFAKSLSAELSALRLERERESKLLKKENQCLKIQLRDTAEAVQAAGELLVRLREAEQAASVAEENFANVRRDNEELKMQVEKLNRKHKTEINTMKQYLTESKLPESALKPLYQENSDTTHNDTTSSYAYDDQAWRAEFGAIYQDHY* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4056 1077 Coils Coil 934 954 - -
Tpr3g4056 1077 Coils Coil 845 872 - -
Tpr3g4056 1077 Gene3D Kinesin motor domain 66 428 IPR036961 -
Tpr3g4056 1077 Pfam Kinesin motor domain 99 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g4056 1077 PANTHER KINESIN MOTOR DOMAIN PROTEIN 51 1058 - -
Tpr3g4056 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 405 IPR027417 -
Tpr3g4056 1077 Coils Coil 976 1024 - -
Tpr3g4056 1077 PANTHER KINESIN-RELATED 51 1058 IPR027640 GO:0003777|GO:0007018
Tpr3g4056 1077 Coils Coil 401 421 - -
Tpr3g4056 1077 SMART kinesin_4 70 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g4056 1077 ProSiteProfiles Kinesin motor domain profile. 72 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g4056 1077 Coils Coil 701 728 - -
Tpr3g4056 1077 PRINTS Kinesin heavy chain signature 133 154 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g4056 1077 PRINTS Kinesin heavy chain signature 264 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g4056 1077 PRINTS Kinesin heavy chain signature 299 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g4056 1077 PRINTS Kinesin heavy chain signature 346 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4056 Tpr-Chr3 45124805 45130965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4056 56 428 Miscellaneous Gene Families AT5G06670 30.653 3.09e-47 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4056 K10400 - gmx:100784708 1357.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4056 3 45124805 45130965 Tpr4g0147 4 1662831 1668565 PCT