Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0106 ATGGCTCCTATGGAAGAAAATGTTGTTGTCTCCAAGCTTGAGAAGTTGTTTAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTATGCCAACAATTCCCAAGCACAGGCTATACATGCCAAGTCCATGATTCACTTTTTGAGAGAAACCCTAGATAATGTTAAACTTGTTGGTGGAGATGGTGACAAGGCTTTTGTGATTGCTGATTTGGGGTGTTCATGTGGAAGCAACACCATTAATGTGGTTAATGTGATAATTAATCACATCATTAAGCGTTATGAAGCTTTAGGTTGCAATCCACCTGAATTTTCAGCCTTTTTTTCTGACCTTCCTAGCAATGACTTCAACACTCTCTTTCAACTCCTTCCTCCACTTGCAACCTATGGTGTTAGCATGGAAGAATGTTTAGCTAATGACAATCAAAGATCCTACTTTGCTGCCGGAGTTCCCGGTTCGTTTTATCGGAGACTTTTTCCGACCAAGTCCGTTGATGTTTTTCACTCTGCCTTCTCTTTGCATTGGTTATCTAAGATACCAGAATCAGTATTGGACAAAAGGTCAATTGCATACAACAAAGGGAAGGTGTTTATTCATGGTGCTAGTGAAGCAACAGCCAATGCCTACAAGAGACAATTCAAAGCAGATTTAGCAGGCTTCTTGAGTGCAAGGTCAGTGGAAATGAAGAGAGAGGGGTCCATGTTCTTAGTTTGTTTGGGAAGAACTTCAGTGGACCCCACAGAACAAGGTGGGGCTGGTGTTCTTTTTGGGACCCATTTTCAGGATGCTTGGGATGACCTTGTCCTAGAGGGATTAATTAGCTCCACAAAAAGAGATAATTTCAACATTCCAGTTTATGCACCAAGTTTGCAAGATTTCAAGGAAGTAGTTGAAGAAAATGGTTCATTTGTGATAAACAAGCTTGAGGTATTCAAAGGAGGAAGTCCCCTTGTTTTGAACAAACCAGATGATGCTGATGAAGTAGGAAGGGCTCTAGCCAATAGCTGTAGGACTGTATGTGGAGTCCTTGTTGATGCTCACATTGGTGATAAGCTAAGTGAGGAACTCTTTCTTAGAGTGGAGCGCCGAGCCGCTAATCGTGCCAAGGAGCTTTTGGAGAAACTTCAGTTCTATCACATAGTTGCATCTCTTTCTTTTTCTCAATGA 1161 0.4195 MAPMEENVVVSKLEKLFSMKGGKGEASYANNSQAQAIHAKSMIHFLRETLDNVKLVGGDGDKAFVIADLGCSCGSNTINVVNVIINHIIKRYEALGCNPPEFSAFFSDLPSNDFNTLFQLLPPLATYGVSMEECLANDNQRSYFAAGVPGSFYRRLFPTKSVDVFHSAFSLHWLSKIPESVLDKRSIAYNKGKVFIHGASEATANAYKRQFKADLAGFLSARSVEMKREGSMFLVCLGRTSVDPTEQGGAGVLFGTHFQDAWDDLVLEGLISSTKRDNFNIPVYAPSLQDFKEVVEENGSFVINKLEVFKGGSPLVLNKPDDADEVGRALANSCRTVCGVLVDAHIGDKLSEELFLRVERRAANRAKELLEKLQFYHIVASLSFSQ* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0106 386 Gene3D Vaccinia Virus protein VP39 31 312 IPR029063 -
Tpr4g0106 386 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 8 384 - -
Tpr4g0106 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 383 IPR029063 -
Tpr4g0106 386 Pfam SAM dependent carboxyl methyltransferase 62 382 IPR005299 GO:0008168
Tpr4g0106 386 Gene3D - 17 367 IPR042086 -
Tpr4g0106 386 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 384 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0106 Tpr-Chr4 1231253 1236536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0106 K18848 - gmx:100807953 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0106 4 1231253 1236536 Tpr4g0106 4 1231253 1236536 ECH
Tpr3g4097 3 45505543 45511020 Tpr4g0106 4 1231253 1236536 PCT