Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4097 ATGGGTGATAATGTTGTAGTGTCCAATATGAAGCTAGAACGCTTGCTTAGCATGAAAGGTGGTAAAGGAGAGGCTAGCTATGCCAACAATTCTCAAGGACAGGCCATACATGCAAAGTCAATGCTTCACCTTCTAAAAGAAGCACTAGATGGAGTTGTCCTTCATGACCCTAACATACCATTTGTAGTTGTGGATTTGGGTTGTTCATGTGGAATCAACACTATCAATGTTATGGATGTGATCATAAAACACATCACTAAACGTTATGAAGCATTAGGATTCAATCCACCTGAATTCTCTGCTTTTTTCTCTGATCTTCCAAGTAATGACTTTAATACCCTTTTTCAACTCCTTCCTCCATTAGCCAACTCTGGTGTTAGTATGGAAGAGTGTCTTGCTGCTAACAATCACCGCTCGTACTTTGCTGCTGGTGTCCCCGGCTCTTTTTACCGGAGACTTTTTCCGGCTAGGTCGGTTGATGTTTTTCATTCTGCATTTTCTCTGCATTGGTTATCTCAGGTACCAGATTCTGTTCAAGACAAAAGGTCAAATGCATACAACAAAGGAAGAGTCTTCATCCATGGTGCTAGTGACATAACAGCAAATGCTTACAAGAAACAATTCCAAACAGATTTGGCAGGTTTTCTTAGCTCAAGATCAATAGAGATGAAAAATAAGGGGTCCATGTTCTTGGTTTGTTTAGGCAGGACTTCAGTGGACCCAACAGACCAAGGTGGGGCTGGTCTCCTCTTTGGGACCCATTTTCAGGATGCTTGGGATGATCTTGTCCAGGAGGGGTTAATTAGCAATGAGAAGAGAGACAGTTTCAACATTCCAATTTATGCACCAAGCCTACAAGACTTCAAGGAAGTGGTTGAAGCTAATGGTTCATTTTCCATTAACAAACTTGAAGTTTTCAAAGGAGGAAGCCCGCTAGTGGTGAATCAACCAGATGATGCAAGTGAAGTTGGAAGAGCTCTAGCCAACAGTTGTAGGAGTGTTTCTGGTGTTCTTGTTGATGCTCATATTGGTGATAAGCTTAGTGAGGAACTTTTCCTTAGAGTGGAGAAAAGAGCCACAAACCATGGCAAAGAGTTATTAGAGAAGCTTCAGTTCTTTCACATTGTTGCATCCCTTTCTTTTGATCAGTGA 1152 0.4158 MGDNVVVSNMKLERLLSMKGGKGEASYANNSQGQAIHAKSMLHLLKEALDGVVLHDPNIPFVVVDLGCSCGINTINVMDVIIKHITKRYEALGFNPPEFSAFFSDLPSNDFNTLFQLLPPLANSGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSVDVFHSAFSLHWLSQVPDSVQDKRSNAYNKGRVFIHGASDITANAYKKQFQTDLAGFLSSRSIEMKNKGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISNEKRDSFNIPIYAPSLQDFKEVVEANGSFSINKLEVFKGGSPLVVNQPDDASEVGRALANSCRSVSGVLVDAHIGDKLSEELFLRVEKRATNHGKELLEKLQFFHIVASLSFDQ* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4097 383 Pfam SAM dependent carboxyl methyltransferase 60 379 IPR005299 GO:0008168
Tpr3g4097 383 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 8 381 - -
Tpr3g4097 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
Tpr3g4097 383 Gene3D - 16 362 IPR042086 -
Tpr3g4097 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
Tpr3g4097 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 381 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4097 Tpr-Chr3 45505543 45511020 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4097 K18848 - gmx:100801476 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4097 3 45505543 45511020 Tpr4g0106 4 1231253 1236536 PCT