LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g0046	ATGGAATCACCTACTTTCGTTTCAAAAGCAAGGACAGCCTTTCATTCCGCTGCTGCTAAAGCGGAACGTGTTCTTCTCGACTTCAAATCAGATCGAGATCAAGATAAACAATCTTCTAATAGCTTTACAAGGCAATCTGGAATTGAATCTCCAAGCAGCACCGAGAACGAATCTAAGCTTCGCGGTGAACCGAAGCATCATATAAAGTGGAGGCCGAAGAATATAGGGATAAAGCAAGATTGGCAAGAGAAGTTTAGGAATATTCGGATAGGGAGAAAAGAAGTTGAAGCTGAAGATACAGATAAAGTTGGGGATGCAAACATGGCAATTCCATTTTATGATGAAAATTTGTATATTTTGAATGTGAAGAATGATCTCGAGGCTAAGGCTTCAGAAGTAATTCCAGCTGTAGAAGCCCTAAATGCTGCGACTAAAGATCCCATTCCTGCATCCTCTGTGCTGAAGCAATTGGCTATAGCTGTTGAGGCTGGAAGTAAGACAAAGTCCATGAAAGATTTTATATCTTCACAAGGAAGTCCTTCACATGCAAGAGATAGGGTAGGCTTAAGTCTCTCTGCAGTTAAGGCTTTAGTGTTGCGAGAAAAGGAGGATAAACTTACCTCTGAGTTTAGTAGGGACGAGAAAGTTGTGCTTTTGATCAATGCTCTTTTTGATCCAGAGGGAGATTTCCTTAGAAGGAAGATCGATTCTAATCCAGAGGAAAATGATATAACATCTTTGCCACGAGATATTCATGGTGCTCCTCCTGAAAGTCTTGTTGTAAAGTTGGCTGAAATTGTTGGAAACTATAAGGCCCTCCGAAAAATGGCTCTGTTCTGGTGCAGCGTTGTTGCTGAACTGAGAAAATTTTGGTATGAAGAACAATATATACCTGGAGTCCCTCAGAATGAGATTCCAGACCTGAAAACATGTCTTCTGAACCAACACTTTCAAGTAATTAATTGCTGTATTTCTCGGAAGAGGCTCCGTATCGTTGCGACTGAATCTCTAGACTCTATGATGATGCAAGCTAGTTCAAGCATTAAAGAATCAGCCAATGATGATGATGGAGTTCCTGCAAGCCCTGTTTTATATGCCAGATTAAACACCGGAGAGCGCGTTCTTCGACTTGGTGCTAATTGCCCCTCTGGTGATTTGACTTTGTTGGAAACTGGCGAGCCTGTGTACTCTCCTGTCACCCAGGAAGGACCTTTGCTTACAGAAGATTTAATCAGAGAAACAGAGGAGTTTGTGCTGCGGACTGGGAGTGTTGGCGCTGGCTGCTCGCAACTGCTCTCAGATATGCAGGCTTTCAAGGCTGCGAATCCTGGATGTATTTTGGAGGATTTTGTAAGATGGCACTCACCTCCTGATTGGACAGACAATGAGGCTAGTATTGAGGACAGTGATGTTTTTGACAGTGGCGAGTCATTGTCGACCAGAGGCCAACTAAGTCGGCGTATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCAGTACCAGCTGTTAAGCAGGCACCTCTTTTCGACGAGGATTTGGCAGTAGAGGGCATCCTCAATACATTTGAGGACATCCATCCTTTCGAGCTTTTTGGGCAGTTGTTTGTCTCTTTACTTGGGTTAGGATTTGTGATTGCTGAACCTCTGCTGTCTAGTAACAAGGACTTCTCAAAGTTGTTCTATGACTGCAAGGAGTACATAGTTACTACATGCCAAAGCTCCAAATGGAGTGAGAAAGTTGATGACCTTGTCCAGGTATATGAAACAGTGGAGACAATGTTAATGAATCCTGAAGAAGCATTGAAGATGGTGAAACAAACAGAAGAATCAACGACGGTTACTGATGAACCAATGAGCCGGTTGAAGAGGCTTAGCCTTATCTTCAGCGGCAAAGATAAAGTATTGAAAAAGACTTGGTCAAAAGATCAACTAAACGATGAAGACAAGTCGACACCGCGACAATCTTTCTCAAGTTTCTTTGAAAACAAATCATCTTTATTTTCAAAGAAACCTCCTAGGTCTGGATCCCCGTCCCAGTCTCCTTCAGAGAAACCTCCTATCGAAACCGAGTGGACAATTGTTTAA	2100	0.4257	MESPTFVSKARTAFHSAAAKAERVLLDFKSDRDQDKQSSNSFTRQSGIESPSSTENESKLRGEPKHHIKWRPKNIGIKQDWQEKFRNIRIGRKEVEAEDTDKVGDANMAIPFYDENLYILNVKNDLEAKASEVIPAVEALNAATKDPIPASSVLKQLAIAVEAGSKTKSMKDFISSQGSPSHARDRVGLSLSAVKALVLREKEDKLTSEFSRDEKVVLLINALFDPEGDFLRRKIDSNPEENDITSLPRDIHGAPPESLVVKLAEIVGNYKALRKMALFWCSVVAELRKFWYEEQYIPGVPQNEIPDLKTCLLNQHFQVINCCISRKRLRIVATESLDSMMMQASSSIKESANDDDGVPASPVLYARLNTGERVLRLGANCPSGDLTLLETGEPVYSPVTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASIEDSDVFDSGESLSTRGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNTFEDIHPFELFGQLFVSLLGLGFVIAEPLLSSNKDFSKLFYDCKEYIVTTCQSSKWSEKVDDLVQVYETVETMLMNPEEALKMVKQTEESTTVTDEPMSRLKRLSLIFSGKDKVLKKTWSKDQLNDEDKSTPRQSFSSFFENKSSLFSKKPPRSGSPSQSPSEKPPIETEWTIV*	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g0046	699	PANTHER	RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT	4	683	IPR045700	GO:0005096\|GO:0043547
	Tpr4g0046	699	PANTHER	RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT	4	683	-	-
	Tpr4g0046	699	MobiDBLite	consensus disorder prediction	28	67	-	-
	Tpr4g0046	699	MobiDBLite	consensus disorder prediction	39	55	-	-
	Tpr4g0046	699	MobiDBLite	consensus disorder prediction	647	699	-	-
	Tpr4g0046	699	MobiDBLite	consensus disorder prediction	655	691	-	-
	Tpr4g0046	699	Pfam	Rab3 GTPase-activating protein catalytic subunit	375	528	IPR026147	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g0046	Tpr-Chr4	470254	476837	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g0046	K18270		-	gmx:100818643	1089.72

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr4g0046	4	470254	476837	Tpr4g0046	4	470254	476837	ECH
	Tpr3g4141	3	46027627	46033361	Tpr4g0046	4	470254	476837	PCT