Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4141 ATGCACCTTGAATCCAGGGTAATGGATGATCAAGGTGGTAATAATTCCTTCGTGTCGAAAGCAAAAACTGTTATCCATTCTGCTGCTGCCAAAGCTGAACGTGTTATCAAGGACTTTAAATCTGATCTTGATTCTGAAAAGCAATTGCGTGACGATTGTGGAAGGCAAAGACATGAGGGAGCTGAATCTGCTAAGAATGAGAATGAGTCAAAGTTTCTGAGTGAATTGAAGCAAATTAAGTGGAAACCTCGAAATATAGGAGGAACAAAGCAGGAATGGAAAGATAGAATTAACAACATACGGAAAGGGCGTAAAGAAAATGAAGTTACAGAAAAGGTTGGAGATGCAAGCATGGCTGCTGTTCCACTTAATGATGAAGATATGTGCATTGTTCATGTGAAAAAGGATCTTGATGCCAATGTTTCAGAAGGATTTCTCTCGGTTGAAGGCTTAACTGCTGCGGCTAAAAGGCCTATTCCTCCATCTTCTGTCCTGAAGCAATTGGCTATAGCTGTTGAGGCTGGAAGGAAAGCAAATTCAATGAAAGATTTTGCAGCTTCATCAGGAGGTTCTTCACCCTCCAAAGAGAGGGTAGGCTTAAGTCTCTCTGCGGTGAAGGCTTTAGTGTTACGCGGGAAAGAGTACAAACTTGCCTCTGAGTTTAGTAGCAATGAGAAAGTTGTGTGTTTGATTTGTTCTCTTTTTGATCCAGAGGGAGATTTCCTTAGAAGGAAGATCAACTCCAATTTGGAGGAAATTGACATAACATCTTTTGTAAAAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAGTAATCGGAAGCTTTAAGACCCTTCGAGAAATGGCATTTTTTTGGTGCTGGTTTGTTGCTGAACTGAGAAAACTTTGGTCGAAAGAAAAACATTTACCTGGAATCCCTCTTGATGACATTCCAGATTTGAAGTCATGTCTTCTCTATCAACATTTTCAAGTAATCAATTGTTGCGTCTCTCGGAAACAGCGCCATGTCATTGCAACTGAATTGCTTGATTCTATGATGATGAAGGCAAATTCAAATGAATTAGAATCAACAAACTGTGGCAATGATACTTCTGCAAGTCGTTTGTTATATGCTCGAGTAAGTACTGGAGAGCTTGTTCTTCGACTTGGTGCTCATTCTCCATCTGGAAATATGATGTTATTGGAAACTGGCGAGCCTGCGTACTCTCCTATCACCCAGCAAGGAGTGTTGCTTACCGAAGATATGATCAAAGCGAACGAGGAATTTGTGCTGCAGACAGGGAGTCTCGGTGCCGGGTGCTCTCAACTCCTGTCCGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTGGGAAGACTTTGTGAGATGGTACTCTCCTCCTGATTGGATCGAAAGCGAAGCAAGTACTGAAGATAGTTGTTCTTCTGATGGTAGTGGTAGCGAGTCATTGTCTACCAGAGGTCGTCTAAGTCGACGGATGCGGAAAGAAGGTAATTTGTGGCGCGAATTTTGGGAAACATCTCAGCCGGTACCTGCTGTGAAACAGGCACCTCTCTATGATGAGGATTTGGCAGTGGAAGGGATTCTTCATGCATTTGAGGACATTCAACCAGTTGAGCTTTTTGGGCAGCTGTTTGTTTCACTACTTGGTTTAGGATTTACAATTGCTGAACCATTGCTTTCTGGTAACGAAGACTTCTCGAAGTTGTTCAATGACTGCAAAGAGTATGCTATTACTTCTTGTCAAAGCATCAGATTCAGCGAGAAAGTTGGTGAACTTGTTCAGGTATATGAAACAGTGGAGACAATGTTGCTGAATCCTGAGGAGGCACTAAAGATGATGAACCCTTCAGAAGAATCAACTGCAACTACCGGTGAAACAAAGCGTCGGTTCAAGAAGCTTAGCCATATCTTTGCTGGCAAAGATAAACTTTTGTCAAGGTCTTTTCTGAAAGATAAGATCAACAATGAAGAAAAGAAGATTCGACAATCTTTTTCGAGTTTCTTTGACAAGAAGTCGACCTTATTCTCAAAGAAGCCTCCCAAAGAAGGAAAGTTGTCCCCTACGGAGACAACTCCCTCTATGGAAGATGATTGGACAATAATTCATATTTAG 2139 0.4175 MHLESRVMDDQGGNNSFVSKAKTVIHSAAAKAERVIKDFKSDLDSEKQLRDDCGRQRHEGAESAKNENESKFLSELKQIKWKPRNIGGTKQEWKDRINNIRKGRKENEVTEKVGDASMAAVPLNDEDMCIVHVKKDLDANVSEGFLSVEGLTAAAKRPIPPSSVLKQLAIAVEAGRKANSMKDFAASSGGSSPSKERVGLSLSAVKALVLRGKEYKLASEFSSNEKVVCLICSLFDPEGDFLRRKINSNLEEIDITSFVKDIHGAPPESLVVKLAEVIGSFKTLREMAFFWCWFVAELRKLWSKEKHLPGIPLDDIPDLKSCLLYQHFQVINCCVSRKQRHVIATELLDSMMMKANSNELESTNCGNDTSASRLLYARVSTGELVLRLGAHSPSGNMMLLETGEPAYSPITQQGVLLTEDMIKANEEFVLQTGSLGAGCSQLLSDMQAFKAANPGCIWEDFVRWYSPPDWIESEASTEDSCSSDGSGSESLSTRGRLSRRMRKEGNLWREFWETSQPVPAVKQAPLYDEDLAVEGILHAFEDIQPVELFGQLFVSLLGLGFTIAEPLLSGNEDFSKLFNDCKEYAITSCQSIRFSEKVGELVQVYETVETMLLNPEEALKMMNPSEESTATTGETKRRFKKLSHIFAGKDKLLSRSFLKDKINNEEKKIRQSFSSFFDKKSTLFSKKPPKEGKLSPTETTPSMEDDWTIIHI* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4141 712 MobiDBLite consensus disorder prediction 475 494 - -
Tpr3g4141 712 Coils Coil 29 49 - -
Tpr3g4141 712 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 15 710 - -
Tpr3g4141 712 MobiDBLite consensus disorder prediction 475 498 - -
Tpr3g4141 712 Pfam Rab3 GTPase-activating protein catalytic subunit 387 541 IPR026147 -
Tpr3g4141 712 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 15 710 IPR045700 GO:0005096|GO:0043547
Tpr3g4141 712 MobiDBLite consensus disorder prediction 43 71 - -
Tpr3g4141 712 MobiDBLite consensus disorder prediction 684 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4141 Tpr-Chr3 46027627 46033361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4141 K18270 - gmx:100800515 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4141 3 46027627 46033361 Tpr4g0046 4 470254 476837 PCT