Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0044 ATGGGTTTCAAAGCTTTTTTTGTGTATTCTTTTGTATTTATTTTAAGCTATGGTTTTTCAATGTCTCAAATGGTTCCAGCTGTTTATGTATTTGGAGATTCACTTGTAGATGTTGGAAACAACAATTACTTGACTCTTTCTATTGCTAAGGCTAATCATCGTCATTATGGTATTGATTTTCTTGATCATAAACCAACTGGGAGATTTAGCAACGGTAAAAATGCTGCTGATTTTATTGGTGAGAAATTGGGTTTGGCAACTTCACCACCTTACCTCTTTTTAATATCAAAGGCCAACAAAAGTGTGAATAATGTATCCTTCATCAATGGTGTTAGCTTTGCTTCCGCAGGTGCTGGAATATTTGATGGTACAGATGAACGTTATAGACAATCGTTACCGTTGACAAAACAAGTGGATTATTACTCAACTGTTGTGTATGGAGAACTGACACGAGAAGTTGGAGCAAGTGCTTTACAAAAGCATCTCTCAAAATCAATTTTTGCTGTTGTGATTGGAAGCAATGATATCTTTGGATATTTTGAGTCATCTGAACTTCGTAAGAAAAGTACCCCACAACAATATGTTGATTCCATGATTTTCTCACTAAAACTGCAACTTCAGCGATTATATGATAATGGTGGCCGTAAATTTGAGATTGCGGGAGTAGGGGCACTTGGATGCTGTCCCGTGTTCAGGCTCAAGAACAAAACAGAATGCGTTGTAGAAGTCAATTACTGGTCAGTTCAATATAACAAAGGTCTTCAATCTATGTTGAAAGAATGGCAATCGGAGAATGAAGGCATAATCTACTCGTACTTTGACACTTATTCCGCCATGAGCAGCCTTATTCAAAGTCCAGCTTCCTACGGATTTACAGAGGTGAAAGGTGCTTGTTGTGGACTAGGAGAGTTAAATGCCAGGGCTCCTTGCCTGCCTGTGTCAAACCTTTGTCCCAACAGACAAGACCATGTTTTTTGGGATCAATTTCATCCAACGGAGGCAGCTTCGCGTATCTTTGTCGACAAAATTTTCGATGGTTCTTCAACTTACACTTCTCCTATTAATATGAAACAGCTAGTAGCAGCCTGA 1089 0.3866 MGFKAFFVYSFVFILSYGFSMSQMVPAVYVFGDSLVDVGNNNYLTLSIAKANHRHYGIDFLDHKPTGRFSNGKNAADFIGEKLGLATSPPYLFLISKANKSVNNVSFINGVSFASAGAGIFDGTDERYRQSLPLTKQVDYYSTVVYGELTREVGASALQKHLSKSIFAVVIGSNDIFGYFESSELRKKSTPQQYVDSMIFSLKLQLQRLYDNGGRKFEIAGVGALGCCPVFRLKNKTECVVEVNYWSVQYNKGLQSMLKEWQSENEGIIYSYFDTYSAMSSLIQSPASYGFTEVKGACCGLGELNARAPCLPVSNLCPNRQDHVFWDQFHPTEAASRIFVDKIFDGSSTYTSPINMKQLVAA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0044 362 Pfam GDSL-like Lipase/Acylhydrolase 28 342 IPR001087 GO:0016788
Tpr4g0044 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 360 - -
Tpr4g0044 362 CDD SGNH_plant_lipase_like 26 347 IPR035669 -
Tpr4g0044 362 SUPERFAMILY SGNH hydrolase 142 344 - -
Tpr4g0044 362 Gene3D SGNH hydrolase 18 348 IPR036514 -
Tpr4g0044 362 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 7 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0044 Tpr-Chr4 448890 453315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0044 25 360 Acyl Lipid Metabolism Gene Families AT4G10950 30.702 1.40e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0044 - - gmx:100777307 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0044 4 448890 453315 Tpr4g0044 4 448890 453315 ECH
Tpr3g4149 3 46077819 46081094 Tpr4g0044 4 448890 453315 PCT