Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4149 ATGATGTGGAATTCCTTTCTCTTTTTCTTTTTCTCTTTCTTCATCTTCAATTTAGGATTCTTAGAGGCTCAAAAGGTTCCTGCTATTTATGTTTTTGGAGACTCACTTGTTGATGTTGGAAACAATAATTACTTGAATGATACCTTACTAAAAGCTATGTTTCCTTACTATGGCATTGATTTTCCGACTAAGAAACCTGCTGGGAGGTTTAGTAATGGCAAAAATGCTGCTGATTTGATTGCTGAAAAAATAGGTGTGCCCACTTCACCACCTTATCTGTCCCTAGTATCTAAGATCAAAAACAACAACAGGAATGTATCCTTTTTGGGTGGTGTTAGCTTTGCCTCTGGAGGTGCTGCAATCTTTAATGTCACACATAAAAATTTTTGGGGATCAATACCTTTGACAACGCAAGTGGACTACTATTCACAAATGTGTGACCAATTGACACAACAAATAGGAGCATCTACACTTCAGAAACATATCTCAGAATCTATCTTCTTAGTTGTAATTGGCAACAATGATATCTTTAATTACTTTAATTCAAAGGATCTTCAAAAGAAAAACACCCCACAAAAATATGTCAAGTCCATGGCTTCTTCATTAAAAGTGCAACTACAGAGATTATACAAAAGTGGTTCAAGGAGATTTGAGATTGCTGGTGTTGCTGCAATTGGATGTTGTCCTACATTGAGGCTCAAGAACAAAACAGAATGCTTTTCAGAAGCCAATTTATTGTCAGTTGAATTTAATAAAGAACTTCAATCCATGTTAAAGCAATGGGAATCGGAAAACAAGAACATAAGTTACTCATTCTTTGATACTTATTCTGCCATCCAAGACATCATTCACGATCCAACTTCTCATGGATTTGTTGATGTGAAAGCAGCATGTTGTGGAGATGGTGAACTGAATGCTGAGTATCTATGTCTACCAAGTTCAAACATTTGTAGCAATAGACAAGACCATATCTTTTGGGATGCTGTCCATCCTACAGAGGCAGCAACTCGTATAATTGTGGATAGACTTTTTAATGGACCTTCAAAATACACATATCCTGTTAATATGAAAGAGTTACTTCATGTATCAATTTCCCAATCACTTAATCCCTTTAATTTCTTCATTTTATTGGGTTTGTTGGTTACTTGTTATCAACTAAATACAAACTAA 1170 0.353 MMWNSFLFFFFSFFIFNLGFLEAQKVPAIYVFGDSLVDVGNNNYLNDTLLKAMFPYYGIDFPTKKPAGRFSNGKNAADLIAEKIGVPTSPPYLSLVSKIKNNNRNVSFLGGVSFASGGAAIFNVTHKNFWGSIPLTTQVDYYSQMCDQLTQQIGASTLQKHISESIFLVVIGNNDIFNYFNSKDLQKKNTPQKYVKSMASSLKVQLQRLYKSGSRRFEIAGVAAIGCCPTLRLKNKTECFSEANLLSVEFNKELQSMLKQWESENKNISYSFFDTYSAIQDIIHDPTSHGFVDVKAACCGDGELNAEYLCLPSSNICSNRQDHIFWDAVHPTEAATRIIVDRLFNGPSKYTYPVNMKELLHVSISQSLNPFNFFILLGLLVTCYQLNTN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4149 389 Pfam GDSL-like Lipase/Acylhydrolase 29 342 IPR001087 GO:0016788
Tpr3g4149 389 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 2 360 - -
Tpr3g4149 389 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 360 - -
Tpr3g4149 389 SUPERFAMILY SGNH hydrolase 29 344 - -
Tpr3g4149 389 CDD SGNH_plant_lipase_like 27 347 IPR035669 -
Tpr3g4149 389 Gene3D SGNH hydrolase 19 348 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4149 Tpr-Chr3 46077819 46081094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4149 26 361 Acyl Lipid Metabolism Gene Families AT4G10950 31.579 2.85e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4149 - - mtr:MTR_3g052580 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4149 3 46077819 46081094 Tpr4g0044 4 448890 453315 PCT