Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0043 ATGGGTCAGATCGTGAGGAGGAAGAAGAAAGGAAGACCTTCTAAAGCAGATCTAGCTCGCAGTTCCGGTCAATCTCCGGCAGCCACTTCTCAAAACGATTTACGACGGAGCCGTCGACGGAGAAATGTGAGGTATAATATCATAGACTATGATGATTACCTCGATGAAGAAGATGAAGATGAAGAAGAAGAAGATGATGAAGATGAAAGAAGACGCGAGAAGAAGAAGTTGAAGCTTGTTGAGAAGCTGAATCAAGGTGTGGATGAAGATGATGAAGAAGAAGATGAAGATGATGATAATGAAAAGCATAGTCGCGGTAGGTCGCGTGTGAAACACGCGCCTGTTTCTGATAAAAGAAAATTTGGAAGAAAAAATGAAGATAAGGTTGAAGAAGAAGAAAATGAAAATGAAGAAGAAAGAGAGGAAGAAGAAGAAGAAGTAGAAGAAGAAGAAGAAGAAAGGATTGAAAATGCAGAGGAACATGATGATGAAGAAGAACGTGTAGCTGAAAGGGGTGAGGTAAAGGGCATAAAAGTAGATGATTCAAGAGGGCTCCACTCTGTTACAGGGACCCCTTTGAAGGTTCAGTCCGAAATTCCATTGCCTGATAAGAGGACCCTTGAATTGATCCTTGACAAACTTCAGAAGAAGGATACCTATGGTGTTTATGCAGAGCCAGTTGATCCGGAAGAGCTTCCTGATTATCATGATGTCATTGATAATCCCATGGACTTTGCCACCGTGAGGAAGAAGTTGGCAAATGGATCTTACACTACATTAGAACAATTTGAGAGTGATGTATTTTTGATTTGCTCAAATGCAATGCAATACAATTCGTCAGATACTATATACCACAAACAGGCACGTTCAATACAAGAACTGGCTAGAAAGAAGTTTGAGAAGTTAAGGATCAACTTAGAACGCTCTCAGAGTGAGATAAAATCTGAACAAAAAACAAAATCCAATTCCTTAGGTAAGAAGCCAGCAAAAAGGCCACTTGGTTATGCTTCACAGGAACCTGTTGGCTCTGATTTCTGCTCTGGTGCAACTCTTGCTACTACTGGAGAAGTACTGCCAATTTCCCATCCAATTCAAGGTATCTTCTGTGAAAGGCCTGGCAACATTGATGTCCCTGTGGACGGGAGTGCTTTCTTTTTCGACGTAAATCAAGAAAAAACAGAAGAATTTATTTCAGGGAAAGGCCTTCCCTCCAAGATGGGAAGGAAATCATTGGTGCAAGATTATGAACGCCGCGCTACTTATAATATGCCTAATCTACCAGTTACTAGATCTGATTCAATATTTACGACGTTTGAGAGTGAAATTAAGCAGTTAGTTACTGTTGGACTTCAAGCTGAATATTCCTATGCCAGGAGTTTGGCTCGTTTTGCTGCAACTCTAGGACCTACTGCTTGGAGAATAGCTTCCCAGAAGATTCAACAGGCACTTCCATCTGGCTGTAAATTTGGTCGTGGTTGGGTTGGGGAGTATGAACCACTTCCAACCCCAGTATTAATGCTTGATAACCGTGTCCCGAAACAACCTAATCTGGCAACAAAGTTGCAGTCTACTAAATTACCAAACGTCGGCAAAAATGGTAAGAATGTAGAATCCACCTTGGAACATCCTGTAAATGAACCGATGTTTGAGGGGAAACAGCCTTCAGTACGCCCTGGTTGTGGACTAACATCAGAAGGAAAACCATCATTGTTTGGTTCTGCTGGAGTACGACCGAATGCTTCTATCAATCTCACTCGTCAGCAATCAAATGTCCAAACCAGGAATGTTGGCAAGTCTGAGAATAAGGGTTTGCAACAAGTGGAATTGAACTCGTTACCCTCAAGCGATCAGGACAATGCCAGTCTAGTTGCAAAGCTTACAAGTAATGCTCCTGCAGCTGTTTCTAAACCTAGAGAGATGGTACCAAGTAACAGGAACATTTTAACATCTATGCCTTTCAAGCAGCCTGATGCTAACATAGTTGTTAGTGGAGAGTTACCAAATGGAAAAATCAGGAATACTAGTTTCAATAGACGGATGACTGGTCCATCATCTGAAAGTACATCAACTCAGACGGGCAGATCAGCTCCCTTTGTTACCCATGGGCAAGATCAGAGTCTTAGCGACCCAGTTCAGATGATGAGAATGTTAGCCGAGAAAGCTCAAAAGCAGCAGGCTTCTAGTTCATCTAATCATTCCCCTGTCGAAACTCCACCAGCGACTCCATCAGTTCCACCTGGACGGAGAGAAGACTTGAGCAATGCCTCGGCAGCAGCTGCTCGTGCATGGATGTCTGTAGGAGCTGCAGGGTTTAAACAAGGACCTGAAAATTCTAGCTCACCCAAAAGTCAGATTTCTGCCGAGTCATTGTACAACCCAACCCGAGAGTTCCAGCAGCATCTTTTACGAATTAGGGGCGAGTTTCCTCCTGGTGGAATGCCTTTCCAGTCAGAGAAGAACAATTTTCCTTTTCAGGCACTTGTACCTCAACACATGCACGCAGTTGGTGTTTCACAATTTCCAAACCGACCTATGATTTTCCCTCAACAAGTCGCAGCTTCCGACCTATCAAGATTTCAAATGCAGCCCCCTTGGCAAGCTGTCCGGCCTCATAGTCAACCAAGACAGAAACAAGAAACACTTCCTCCTGACTTGAATATTGATTTCCAATCACCTGGGTCCCCTGCAAAACAATCTTCTGGTGTGCATGTTGACTCACAGCAACCAGACCTGGCTTTGCAGCTATGA 2748 0.433 MGQIVRRKKKGRPSKADLARSSGQSPAATSQNDLRRSRRRRNVRYNIIDYDDYLDEEDEDEEEEDDEDERRREKKKLKLVEKLNQGVDEDDEEEDEDDDNEKHSRGRSRVKHAPVSDKRKFGRKNEDKVEEEENENEEEREEEEEEVEEEEEERIENAEEHDDEEERVAERGEVKGIKVDDSRGLHSVTGTPLKVQSEIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDNPMDFATVRKKLANGSYTTLEQFESDVFLICSNAMQYNSSDTIYHKQARSIQELARKKFEKLRINLERSQSEIKSEQKTKSNSLGKKPAKRPLGYASQEPVGSDFCSGATLATTGEVLPISHPIQGIFCERPGNIDVPVDGSAFFFDVNQEKTEEFISGKGLPSKMGRKSLVQDYERRATYNMPNLPVTRSDSIFTTFESEIKQLVTVGLQAEYSYARSLARFAATLGPTAWRIASQKIQQALPSGCKFGRGWVGEYEPLPTPVLMLDNRVPKQPNLATKLQSTKLPNVGKNGKNVESTLEHPVNEPMFEGKQPSVRPGCGLTSEGKPSLFGSAGVRPNASINLTRQQSNVQTRNVGKSENKGLQQVELNSLPSSDQDNASLVAKLTSNAPAAVSKPREMVPSNRNILTSMPFKQPDANIVVSGELPNGKIRNTSFNRRMTGPSSESTSTQTGRSAPFVTHGQDQSLSDPVQMMRMLAEKAQKQQASSSSNHSPVETPPATPSVPPGRREDLSNASAAAARAWMSVGAAGFKQGPENSSSPKSQISAESLYNPTREFQQHLLRIRGEFPPGGMPFQSEKNNFPFQALVPQHMHAVGVSQFPNRPMIFPQQVAASDLSRFQMQPPWQAVRPHSQPRQKQETLPPDLNIDFQSPGSPAKQSSGVHVDSQQPDLALQL* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0043 915 MobiDBLite consensus disorder prediction 1 180 - -
Tpr4g0043 915 MobiDBLite consensus disorder prediction 164 180 - -
Tpr4g0043 915 MobiDBLite consensus disorder prediction 718 758 - -
Tpr4g0043 915 SMART bromo_6 196 304 IPR001487 GO:0005515
Tpr4g0043 915 MobiDBLite consensus disorder prediction 51 67 - -
Tpr4g0043 915 ProSiteProfiles Bromodomain profile. 215 285 IPR001487 GO:0005515
Tpr4g0043 915 CDD Bromodomain 203 299 - -
Tpr4g0043 915 Coils Coil 292 319 - -
Tpr4g0043 915 Gene3D - 202 323 IPR036427 GO:0005515
Tpr4g0043 915 PRINTS Bromodomain signature 232 248 IPR001487 GO:0005515
Tpr4g0043 915 PRINTS Bromodomain signature 248 266 IPR001487 GO:0005515
Tpr4g0043 915 PRINTS Bromodomain signature 266 285 IPR001487 GO:0005515
Tpr4g0043 915 MobiDBLite consensus disorder prediction 721 737 - -
Tpr4g0043 915 MobiDBLite consensus disorder prediction 865 915 - -
Tpr4g0043 915 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 915 - -
Tpr4g0043 915 Coils Coil 122 168 - -
Tpr4g0043 915 MobiDBLite consensus disorder prediction 68 85 - -
Tpr4g0043 915 MobiDBLite consensus disorder prediction 310 333 - -
Tpr4g0043 915 ProSitePatterns Bromodomain signature. 221 277 IPR018359 -
Tpr4g0043 915 SUPERFAMILY Bromodomain 198 302 IPR036427 GO:0005515
Tpr4g0043 915 Pfam Bromodomain 209 289 IPR001487 GO:0005515
Tpr4g0043 915 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 915 - -
Tpr4g0043 915 MobiDBLite consensus disorder prediction 18 32 - -
Tpr4g0043 915 MobiDBLite consensus disorder prediction 131 163 - -
Tpr4g0043 915 MobiDBLite consensus disorder prediction 665 705 - -
Tpr4g0043 915 MobiDBLite consensus disorder prediction 668 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0043 Tpr-Chr4 432669 439298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0043 K22184 - gmx:100799986 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0043 4 432669 439298 Tpr4g0043 4 432669 439298 ECH
Tpr3g4150 3 46087856 46092749 Tpr4g0043 4 432669 439298 PCT