Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4150 ATGGTTCAGATCGCAAAGAGGAAGAAAGGAAGGCCGTCGAAGGCGGATCTAGCTCGCCGCTCCGCCGAATCTCAAGCCGCCGCAACGGAATCCGATTCCCGGCGAAGTCTCCGCCGCAAGAACGTGAGGTACAATATAATTGATTACGATGGTGATTACATCGATGATGAAGAAGATGAGAGGAGGCGCGAGAAGAAGAAGCTCAAATTGATGGCAAAACTACAGCAGGTTGAAGGGGAAGAAGAGCAGCAAGAATTGGAAGATCACGCAACAATGGAGGAAGAAGAAGAGTGTGATGAAATTGAAGGTGGTGAAGAGAATGAAGATGCTGAAGAAAAACATGAAGAAGATAGTGTGATAAAGGGCACAAAAGTGGAATCAAAAGGGCTCCACTTTGTTTCTGTTTCAGGAATTCCAGCCAATTATCAATATGGGATTCCATTGCCTGATAGGAAGATTTTGGAAGTGATCCTTGACAAGCTACAGAAGAAGGACACGTATGGTGTGTTTGCAGAGCCGGTTGATCCGGAAGAGCTTCCTGATTATCACGAAGTGATTGAGCATCCCATGGATTTTGCCACAGTCAGGAAGAAGTTGGCAAATGCAGCTTATCCTACCTTAGAACAATTTGAGAGTGATATATTTTTAATTTGCTCAAATGCAATGAAATACAATTCACCAGAGACTGTATACCATAGACAGGCACGAACTATACAAGAACTTGGGCGAAAGAAGTTTGAGAAGTTAAGGATTAAATTTGAACGTACTCGGGTTGAGCTAAATTCAGAACTGAAAACACGGTCTAATTCTTTGGTTAAGAAGTCATTGAAAAAGCTACCAGGTTGTGCCTCACAAGAATCTGTTGGCTTTGATTTATCATATGGAGATGTACAGCCAACTTCCTATCCAATGCAAAGTGGTAGCTATGAGAGGCATGGAAACATTGATGGTATTGTGACAGGGAATGCTTTCTTGATTGATGCAAATCAAGATAAAGCTGAAGATGTTTTCTCAGGGAAGAATATGCTCTCTAAGATTGGAAAGAAGTCATCTTTGCTTGAAGACAATCGTCGTTCATCTTATAATATGTCCAATCAACCAATCACTAGATCAGATTCAACATTTATGACCTTCGAGAGTGGAACGAGACAGCTGGTTACTGTTGGTGTCCATGCTGAATATTCCTATACTAGGAGTTTGGCTCGTTTTAGTGCATCTCTAGGACCCATTGTTTGGAAAATTGCTTCCAGCAGGATTCAACAGGCACTTCCTGCAGACTGTAAATTTGGCCGTGGCTGGGTTGGAGAATATGAAGCACTTCCAAACCCAATACTTATGCTTAGTAATCATCTCCAGAAAGAAACTGGTTTGATTATGAAATTGCACGGTGACAAAAATGGTAAGGATGTAGAAGCCAAAACTGAACATCCTGTAAATGGACGGATGCTTGAGCAAAAACATTCTTCAGATTGTCCTACCAGTTGGCCTGCATCTGAAGGAAATCCTTCTATTGGTTCTGCTGGAATGAATCCCAACACTCCTCTCAACATCCCCAATCAGCAGAATGCCCAATCTAGGAATTTTGGCAAATCTAAGAATAATAGTTTGAATAAAGTGGAGCTGAAATCTTTACCCTCAAGTAATCAAAATAATTCCAGTCTGGTTGCAAAGTTTGCAAGTAATACTCCTATAGCAGAGTCGAAGCACCAAGAGATGGCGCCTAGGAACTTGAACACTTTGCCAGCTACAACTTTCAAGCAGCCGGATACAAATGAAGTTGGTAGTGGAGAATTACCTGATAGAAACGTCATGAATACAAGCTTGAATAGACGGTCAACTGGTTCATCATCTGACATTGCATCAAACCAAGCAATCAGAACAGGTCCTTTTGTTTTCCATGGACAAGAGCAGGGTCTCACTGACCCAGTTCAGTCGACGAGAATGTTCACAGAAGAGGCTCAAAAGACCCAGACTTCTTCTAACCCTTCACCAGTTGACACTCTGCCAGAAATGCCATCAGCTCCATCTGGACAAAGAGATGCCTCGGGCAATGCTTCAGCGGCAGCTGCTCAGGCATGGATGTCTGCAGGCGCAGGAGGTTTTAAACTAGGACCTGAGAATACTGCTTCATCCAAAAATCAGGTTTCTGCAGATCCTCTTCATAACTCAACGAGGGAGTTCCATCAGCATATTTCACGAATTCAGGGTGAGTTTCCTTCTGGCGGAATGTCGGTCCAGTCTAATAAGAACAATTTTCCATTTAATTCACCTAGACCTCAACCTATTCACACAAGTTCTGTTTCACAGTTTCCCAACCGACCTATGGGTTTCCCTCAATCAACATCCGCAGACCATCCTAGATTTCAAATGCAGTCCCCTTGGCGAGGCCTCAGTCCTCAAAGCCAACCGAGGCAGAAACAGCAAACCCTTCCGCCTGACTTGAATATTGATTGTCACTCTCCAGGGTCACCTGCAAAGCAATCCTCTGGTGTTGTTGATTCACAGCAACCAGACCTAGCCTTGCAACTATGA 2532 0.4336 MVQIAKRKKGRPSKADLARRSAESQAAATESDSRRSLRRKNVRYNIIDYDGDYIDDEEDERRREKKKLKLMAKLQQVEGEEEQQELEDHATMEEEEECDEIEGGEENEDAEEKHEEDSVIKGTKVESKGLHFVSVSGIPANYQYGIPLPDRKILEVILDKLQKKDTYGVFAEPVDPEELPDYHEVIEHPMDFATVRKKLANAAYPTLEQFESDIFLICSNAMKYNSPETVYHRQARTIQELGRKKFEKLRIKFERTRVELNSELKTRSNSLVKKSLKKLPGCASQESVGFDLSYGDVQPTSYPMQSGSYERHGNIDGIVTGNAFLIDANQDKAEDVFSGKNMLSKIGKKSSLLEDNRRSSYNMSNQPITRSDSTFMTFESGTRQLVTVGVHAEYSYTRSLARFSASLGPIVWKIASSRIQQALPADCKFGRGWVGEYEALPNPILMLSNHLQKETGLIMKLHGDKNGKDVEAKTEHPVNGRMLEQKHSSDCPTSWPASEGNPSIGSAGMNPNTPLNIPNQQNAQSRNFGKSKNNSLNKVELKSLPSSNQNNSSLVAKFASNTPIAESKHQEMAPRNLNTLPATTFKQPDTNEVGSGELPDRNVMNTSLNRRSTGSSSDIASNQAIRTGPFVFHGQEQGLTDPVQSTRMFTEEAQKTQTSSNPSPVDTLPEMPSAPSGQRDASGNASAAAAQAWMSAGAGGFKLGPENTASSKNQVSADPLHNSTREFHQHISRIQGEFPSGGMSVQSNKNNFPFNSPRPQPIHTSSVSQFPNRPMGFPQSTSADHPRFQMQSPWRGLSPQSQPRQKQQTLPPDLNIDCHSPGSPAKQSSGVVDSQQPDLALQL* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4150 843 MobiDBLite consensus disorder prediction 780 843 - -
Tpr3g4150 843 Coils Coil 54 87 - -
Tpr3g4150 843 SMART bromo_6 143 251 IPR001487 GO:0005515
Tpr3g4150 843 ProSiteProfiles Bromodomain profile. 162 232 IPR001487 GO:0005515
Tpr3g4150 843 MobiDBLite consensus disorder prediction 464 499 - -
Tpr3g4150 843 MobiDBLite consensus disorder prediction 81 113 - -
Tpr3g4150 843 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 843 - -
Tpr3g4150 843 MobiDBLite consensus disorder prediction 650 667 - -
Tpr3g4150 843 Gene3D - 149 270 IPR036427 GO:0005515
Tpr3g4150 843 MobiDBLite consensus disorder prediction 780 814 - -
Tpr3g4150 843 CDD Bromodomain 150 246 - -
Tpr3g4150 843 PRINTS Bromodomain signature 165 178 IPR001487 GO:0005515
Tpr3g4150 843 PRINTS Bromodomain signature 179 195 IPR001487 GO:0005515
Tpr3g4150 843 PRINTS Bromodomain signature 195 213 IPR001487 GO:0005515
Tpr3g4150 843 PRINTS Bromodomain signature 213 232 IPR001487 GO:0005515
Tpr3g4150 843 SUPERFAMILY Bromodomain 143 249 IPR036427 GO:0005515
Tpr3g4150 843 MobiDBLite consensus disorder prediction 821 843 - -
Tpr3g4150 843 ProSitePatterns Bromodomain signature. 168 224 IPR018359 -
Tpr3g4150 843 MobiDBLite consensus disorder prediction 1 41 - -
Tpr3g4150 843 MobiDBLite consensus disorder prediction 464 483 - -
Tpr3g4150 843 MobiDBLite consensus disorder prediction 650 688 - -
Tpr3g4150 843 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 843 - -
Tpr3g4150 843 Pfam Bromodomain 155 236 IPR001487 GO:0005515
Tpr3g4150 843 MobiDBLite consensus disorder prediction 74 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4150 Tpr-Chr3 46087856 46092749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4150 K22184 - gmx:100792844 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4150 3 46087856 46092749 Tpr4g0043 4 432669 439298 PCT