Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0031 ATGGCGTCGTTATGTGGTGGCACCGCCTGCTTCCAGATTCCGGCCATAAACGGCGGCGGCATACTGTGCAACCACACTCCATTGAACACCAGAAGAGGGTGTGTTACCCTTTCCTCATCGAAACTCTCTTCATCATTCAAATGCTTGGCCATTTCTTCTGATTCCCGAATAGTAATTAAGGAAGCTGTTGAAACAGAAAAAGCTCCTGCAGCTTTAGGACCATATTCTCAAGCAAACAAAGTCAACAACATTCTTTTTGTCTCTGGTGTTCTTGGTCTTGTTCCTCAGACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAAACTGAACAGCTTCTCAAGAACATGGGTGAAATCCTTAAAGCCGGTGGTGCCAGCTACTCATCAGTTGTAAAGACAACAATTATGTTGGCTGATTTGAAGGACTTTAAGAAAGTCAATGAGATTTATGCTAAATATTTCCCTTCACCTTTCCCAGCTCGCTCGACTTATCAAGTAGCTGCCTTGCCATTGGACGCCAAGATTGAAATCGAGTGCATTGCAACATTATAA 552 0.433 MASLCGGTACFQIPAINGGGILCNHTPLNTRRGCVTLSSSKLSSSFKCLAISSDSRIVIKEAVETEKAPAALGPYSQANKVNNILFVSGVLGLVPQTGKFISDNVEDQTEQLLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPARSTYQVAALPLDAKIEIECIATL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0031 183 PANTHER PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEIN 1 183 - -
Tpr4g0031 183 SUPERFAMILY YjgF-like 60 183 IPR035959 -
Tpr4g0031 183 ProSitePatterns Uncharacterized protein family UPF0076 signature. 159 177 IPR019897 -
Tpr4g0031 183 CDD YjgF_YER057c_UK114_family 75 181 - -
Tpr4g0031 183 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 60 182 IPR006056 -
Tpr4g0031 183 Gene3D - 57 183 IPR035959 -
Tpr4g0031 183 Pfam Endoribonuclease L-PSP 66 182 IPR006175 -
Tpr4g0031 183 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 1 183 IPR006175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0031 Tpr-Chr4 341345 343632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0031 K09022 - gmx:100500302 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0031 4 341345 343632 Tpr4g0031 4 341345 343632 ECH
Tpr3g4164 3 46263629 46266720 Tpr4g0031 4 341345 343632 PCT