Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4164 ATGGCGTCTTGGTGTGCTGCAAGGACCTTCCACATTCCACCCATCAACTCCGCCGTTCTCCACCGCCGAGCATCATGGGCCGCCGGGATCGGTGGAGCTTCAGCTGCCGGCACTGCTATGTGGCGTTCCTCTAAGCGCTCTATGCCTTTCTTATGCATGAGCCTTTCCACTGATACCCGGATCAACAAGGAAGCTGTTCAGACTGAAAAGGCCCCGGCGGCATTGGGGCCGTATTCTCAAGCAATCAAAGCCAACAACCTTTTATTTGTCTCGGGTGTACTTGGTCTTGTTCCTGAGACAGGGAAGTTCGTCTCTGATGATGTTGAAGATCAGACTGAGCAGGTTCTCAAAAACATGGGGGAGATCCTAAAATCTGGGGGTGCCAGCTATGCATCAGTTGTTAAGACAACAATTTTGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAACGAGATCTATGCTAAATACTTTCCTTCACCGGCCCCAGCTCGCGCGACATATCAAGTAGCTGCTTTGCCATTGGATGCCAAGATTGAAATTGAGTGCATAGCAGCACTGTGA 561 0.5027 MASWCAARTFHIPPINSAVLHRRASWAAGIGGASAAGTAMWRSSKRSMPFLCMSLSTDTRINKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLVPETGKFVSDDVEDQTEQVLKNMGEILKSGGASYASVVKTTILLADLKDFKKVNEIYAKYFPSPAPARATYQVAALPLDAKIEIECIAAL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4164 186 PANTHER BNAA05G36080D PROTEIN 30 186 - -
Tpr3g4164 186 SUPERFAMILY YjgF-like 62 186 IPR035959 -
Tpr3g4164 186 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 63 185 IPR006056 -
Tpr3g4164 186 Gene3D - 59 186 IPR035959 -
Tpr3g4164 186 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 30 186 IPR006175 -
Tpr3g4164 186 ProSitePatterns Uncharacterized protein family UPF0076 signature. 162 180 IPR019897 -
Tpr3g4164 186 CDD YjgF_YER057c_UK114_family 78 184 - -
Tpr3g4164 186 Pfam Endoribonuclease L-PSP 69 185 IPR006175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4164 Tpr-Chr3 46263629 46266720 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4164 K09022 - gmx:100792467 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4164 3 46263629 46266720 Tpr4g0031 4 341345 343632 PCT