Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0002 ATGGAACAACTCAAATTCATTCTTATTCTTCTAATGTTTCTTTCTTCAACCATCACTTCTGAATATGTTCGTCCTTTACCTCGCAAAAACTTAAACATCCCATGGCCATGGGATTCCAAATCCAAAACTCACTCTTATGAACCTCAACAGGTACACATTTCTTTGGCAGGAGACAAACACATGAGAATTACATGGATAACTGATGATAAACATTCACCTTCATTTGTAGAATATGGAACATTACCTGGTAGATATGATTCAATATCGGAAGGAGAATACACATCATATAGTTATCTGTTATACAGTTCAGGAAAGATACACCATACTGTAATTGGACCATTGGAATACAATACCGTGTACTTTTACCGATGTGGCGGACAAGGTCCTGAGTTCGAGCTCAAAACTCCTCCTGCTCAATTTCCAATTACTTTTGCTGTAGCTGGAGATCTTGGTCAAACTGGTTGGACTAAATCAACGTTAGATCACATTGATCGATGTAAATATGATGTTTATCTTCTTCCAGGTGACCTTTCGTATGCCGATTGTATGCAGCATCTTTGGGACTCGTTTGGAAGGTTAGTTGAGCCGCTTGCTAGTGCGAGGCCATGGATGGTAACACAAGGAAATCATGAAGAGGAGAATATACTATTGTTAACCGATGAGTTTGTGTCCTATAATTCTAGATGGAAAATGCCTTTTAAGGAGAGTAGATCAACTTCAAATCTGTATTATTCTTTTGAAGTTGCAGGTGTTCATGTTATCATGCTAGGGTCTTATGCAGATTATGATGAGTACTCGGAACAATACAGATGGCTAAAGGAAGATCTCTCAAAGGTGGACCGGAAAAGGACACCATGGCTGTTCATGTTATTTCATGTGCCATGGTATAATAGTAACAAAGCTCATCAAGGTGCCGGGGATTATATGATGGCAGTCATGGAGCCATTGCTTTATGCTGCTAGTGTTGATTTAGTTCTTGCTGGTCATGTTCATGCTTACGAACGTTCGAAACGTGTTTATAATGGAAGATTGGATCCTTGTGGTGCTGTCCATATAACCATTGGTGATGGTGGAAACAGAGAAGGCTTAGCTCATAGGTACATAAATCCACAGCCACAGTGGTCGGAATTCCGCGAAGCCAGTTTTGGTCATGGTGAGCTGAAGATTGTAAACTCTACTCATGCCTTCTGGAGTTGGCATAGGAATGATAACGATGAATCAGTAAAAGCTGATGATATATGGATAACCTCTTTGGTAAGTTCAGGATGCGTTGATCAGAAGAGACATGAGCTCAGGAGTATGCTTGCGACACCATAG 1317 0.4032 MEQLKFILILLMFLSSTITSEYVRPLPRKNLNIPWPWDSKSKTHSYEPQQVHISLAGDKHMRITWITDDKHSPSFVEYGTLPGRYDSISEGEYTSYSYLLYSSGKIHHTVIGPLEYNTVYFYRCGGQGPEFELKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDRCKYDVYLLPGDLSYADCMQHLWDSFGRLVEPLASARPWMVTQGNHEEENILLLTDEFVSYNSRWKMPFKESRSTSNLYYSFEVAGVHVIMLGSYADYDEYSEQYRWLKEDLSKVDRKRTPWLFMLFHVPWYNSNKAHQGAGDYMMAVMEPLLYAASVDLVLAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHRYINPQPQWSEFREASFGHGELKIVNSTHAFWSWHRNDNDESVKADDIWITSLVSSGCVDQKRHELRSMLATP* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0002 438 Pfam Iron/zinc purple acid phosphatase-like protein C 349 407 IPR025733 -
Tpr4g0002 438 Pfam Calcineurin-like phosphoesterase 143 333 IPR004843 GO:0016787
Tpr4g0002 438 Gene3D - 139 425 IPR029052 -
Tpr4g0002 438 Pfam Purple acid Phosphatase, N-terminal domain 48 128 IPR015914 GO:0003993|GO:0046872
Tpr4g0002 438 Gene3D - 47 138 - -
Tpr4g0002 438 SUPERFAMILY Purple acid phosphatase, N-terminal domain 44 137 IPR008963 GO:0003993|GO:0046872
Tpr4g0002 438 PANTHER PURPLE ACID PHOSPHATASE 5 428 - -
Tpr4g0002 438 SUPERFAMILY Metallo-dependent phosphatases 141 405 IPR029052 -
Tpr4g0002 438 CDD MPP_PAPs 139 417 IPR041792 -
Tpr4g0002 438 PANTHER ACID PHOSPHATASE RELATED 5 428 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0002 Tpr-Chr4 14135 18946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0002 48 428 Miscellaneous Gene Families AT2G03450 25.275 2.40e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0002 K22390 - gmx:100787977 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0002 4 14135 18946 Tpr4g0002 4 14135 18946 ECH
Tpr3g4180 3 46503638 46507263 Tpr4g0002 4 14135 18946 PCT