Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4180 ATGAAACTCAAACTCATTCTAACGGTTTTATTCATTCTGTCAGTAACTTCCACTGCTGATGATTACATTCGACCTAAGCCTCGAAAAACCTTACATCTTCCATGGGATTCAAAACCCTCTTCTTATCCTCAGCAGGTACACATTTCTTTGGCAGGAGACAAACACATGAGAATTACCTGGATTACTGATGACAAATCCGCACCTTCAGTTGTCGAATATGGAACATTGCCAGGGAAATATAACTCTGTAGCCGAAGGAGAGACAACCTCTTACAGTTACATTTTCTATAGCTCAGGAAAGATACATCATACTGTAATCGGCCCTTTAGAGCCTAATTCTGTTTACTTTTACCGATGTGGCGGACAAGGTCCTGAGTTCCAGCTCAAAACACCTCCAGCTCAATTTCCAATTACATTTGCTGTGGCTGGAGATCTTGGCCAAACCGGTTGGACTAAATCAACATTAGATCACATCGACCAATGCAAATATGACGTTAACCTGATTCCTGGTGACCTTTCATATGCCGATTATATTCAGCATCGTTGGGATTCGTTTGGTAGGCTTGTGCAGCCTCTTGCTAGTGCTAAGCCATTTATGGTAACACAAGGGAACCATGAAGTGGAGCACATACCTTTGTTAAAAGATGGATTTTTATCCTATAATTCTAGATGGAAAATGCCGTTTGAGGAAAGTGGATCGAGTTCGAATCTCTATTATTCTTTTGAAGTTGCTGGTGCTCATATTGTCATGCTTGGTTCCTATGATGATTATGATGTGTACTCAGAACAATATAAATGGCTGAAGACAGATCTGTCAAAGGTGGACAGGAAAAGGACACCTTGGTTGCTTGTCATATTTCATGTCCCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGTGGCGACATGATGGAAGCCATGGAGCCATTGCTTAATGCTGCTAGCGTTGATTTAGTTTTTGCTGGTCATGTGCATGCATACGAACGCTCGAAACGTGTATATAATGGAAAATTGGATCCTTGTGGTGCTGTTCATATAACAATCGGTGATGGAGGAAACAAAGAAGGCTTAGCTCAAAAGTATATAGATCCACAACCGATATGGTCAGAATTTCGTGAAGCGAGTTTCGGTCATGGTGAGCTAAAGATTGTAAACTCGACGCATGCATTCTGGAGTTGGCACCGGAATGACGATGATGAGCCAGTAAAATCTGATGATATTTGGATAACCTCTTTAGTCAGCACAGGATGTGTTGATCAGAAGAAAACTGAACTTGAGCATGCACTTATGACACCCTAA 1302 0.414 MKLKLILTVLFILSVTSTADDYIRPKPRKTLHLPWDSKPSSYPQQVHISLAGDKHMRITWITDDKSAPSVVEYGTLPGKYNSVAEGETTSYSYIFYSSGKIHHTVIGPLEPNSVYFYRCGGQGPEFQLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYDVNLIPGDLSYADYIQHRWDSFGRLVQPLASAKPFMVTQGNHEVEHIPLLKDGFLSYNSRWKMPFEESGSSSNLYYSFEVAGAHIVMLGSYDDYDVYSEQYKWLKTDLSKVDRKRTPWLLVIFHVPWYNSNTAHQGEGGDMMEAMEPLLNAASVDLVFAGHVHAYERSKRVYNGKLDPCGAVHITIGDGGNKEGLAQKYIDPQPIWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWITSLVSTGCVDQKKTELEHALMTP* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4180 433 Gene3D - 42 133 - -
Tpr3g4180 433 Pfam Calcineurin-like phosphoesterase 138 328 IPR004843 GO:0016787
Tpr3g4180 433 Pfam Purple acid Phosphatase, N-terminal domain 43 123 IPR015914 GO:0003993|GO:0046872
Tpr3g4180 433 CDD MPP_PAPs 134 412 IPR041792 -
Tpr3g4180 433 PANTHER PURPLE ACID PHOSPHATASE 18 5 424 - -
Tpr3g4180 433 Gene3D - 134 421 IPR029052 -
Tpr3g4180 433 SUPERFAMILY Purple acid phosphatase, N-terminal domain 34 132 IPR008963 GO:0003993|GO:0046872
Tpr3g4180 433 Pfam Iron/zinc purple acid phosphatase-like protein C 344 400 IPR025733 -
Tpr3g4180 433 PANTHER ACID PHOSPHATASE RELATED 5 424 IPR039331 GO:0003993
Tpr3g4180 433 SUPERFAMILY Metallo-dependent phosphatases 136 403 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4180 Tpr-Chr3 46503638 46507263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4180 43 423 Miscellaneous Gene Families AT2G03450 25.934 3.05e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4180 K22390 - gmx:100782338 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4180 3 46503638 46507263 Tpr4g0002 4 14135 18946 PCT