Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4096 ATGACACCCTTTAATTTTTTCTTTCTATTATACTTTCTATTAATTCCAACAAGTGGTTATTTCCAACCACTTGAAGATGATGGGTTCATCTCTGGTGTTATATCTAATAAAGGTCTTGATTTTGCTAAGGATTTGTTGATAGAGAAAGGTATTGATACTATTGTTCTTCTTAAGTTGCCTGAGATTGAGAATACTGCACAAGTGGCACTTGTTGGAAATGCTAAGGTTGTTCTTTCTGATATTACAATTAAGGATGTTCAAGTTAATTCTTCTTCTGTTGTTATTGGAGAGAGTGGTATAGTTGTAGTTGTTTCAGGTGCTACTGTTGATTTGAGTATGAAGTGGAAGTATACTGTGAGTTCTTGGTTGATTGGAATTTCTGATCATGGGACTGCTTCAATTAAGGTTGAAGGCATGCAAGTGGGACTTACATTAAATTTAAAGAACCAAGGAGGTCTTAAGTTGAGTCTCTTAGATCATGGATGCTATGTGGGTGATTTATCTATAAAGTTGAACGGTGGGGCAGCTTGGCTCTACCAAGTGCTAATAGATGCTTTTCAAGAGAATATAGCATCTTCAGTGGAAGAGGGCATTTCAGATAAAATAAAAGAAGGGATAGAAAAGCTTGATAATTCTTTGCAAACTCTTCCTAAGCAAATCGCACTAGACAAAACTGCTGCACTAAATGTTTCTTTTGTTGGCAATCCCGTGTTGACTAATTCCTCTCTTGCAATTGCAATTAATGGTTTATTCACAAGGACAAGTGAGATTTTAGTACCTCGAAGTTACAAGAATGGATATAAGGTTTCTTCTGCCTGTGGTGGTTTACCAAAAATGATAAAGGTTTCGATACATGAAAATGTATTAAAATCTGCTTCTCTAGTTTACTTCAATGCAGGTAAAATGCAAATAATTATCGATGAACTACCTGATCAGAACCTTCTGAACACTGCTGAATGGAGATTTGTAGTTCCTCAATTATACAAGCGATATCCAAATGACGACATGCAGATTAATATCTCTGTATCTTCTCTACCAGTTATACAAGTGGGCTACCAAGATATTGGTGCTACTCTTTCTGTAGATATAACAATCGATGTTCTAGAAGGTGGCGAAGTCATTCCTGTTGCATGTATATCAGTGGATGTTAGTGCTTCATGTGGTGTGGAAATTTTAGGAAACAACATTGCTGGTAGACTTACATTACAAAATTTTTCTGCATACTTGAAATGGAGCAAAATAGGAAAACTGCACATACATCTTATTCAGTCACTGATATCAAGCACCCTCAAAACAGTTGTCCTACCATACTTGAACCTCCAATTAAAGAATGGATTCCCATTGCCAACTATTGATGGTTATGGATTTCAGAATACTATTATCTTGTACAATTATCCATGGATTTCAGTATGTAGTGATGTTTCCTTCATAGATGAAGACTACTATCTTATTCAACATTCAACTTATGTATCATAA 1476 0.355 MTPFNFFFLLYFLLIPTSGYFQPLEDDGFISGVISNKGLDFAKDLLIEKGIDTIVLLKLPEIENTAQVALVGNAKVVLSDITIKDVQVNSSSVVIGESGIVVVVSGATVDLSMKWKYTVSSWLIGISDHGTASIKVEGMQVGLTLNLKNQGGLKLSLLDHGCYVGDLSIKLNGGAAWLYQVLIDAFQENIASSVEEGISDKIKEGIEKLDNSLQTLPKQIALDKTAALNVSFVGNPVLTNSSLAIAINGLFTRTSEILVPRSYKNGYKVSSACGGLPKMIKVSIHENVLKSASLVYFNAGKMQIIIDELPDQNLLNTAEWRFVVPQLYKRYPNDDMQINISVSSLPVIQVGYQDIGATLSVDITIDVLEGGEVIPVACISVDVSASCGVEILGNNIAGRLTLQNFSAYLKWSKIGKLHIHLIQSLISSTLKTVVLPYLNLQLKNGFPLPTIDGYGFQNTIILYNYPWISVCSDVSFIDEDYYLIQHSTYVS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4096 491 Gene3D - 33 461 - -
Tpr3g4096 491 Gene3D - 37 214 - -
Tpr3g4096 491 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 491 - -
Tpr3g4096 491 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 34 240 IPR017943 GO:0008289
Tpr3g4096 491 Pfam LBP / BPI / CETP family, C-terminal domain 278 459 IPR001124 GO:0008289
Tpr3g4096 491 PIRSF Lipid_binding_protein 7 480 IPR030675 GO:0005615|GO:0008289
Tpr3g4096 491 Pfam LBP / BPI / CETP family, N-terminal domain 38 209 IPR017942 GO:0008289
Tpr3g4096 491 SMART bpi2_2 274 470 IPR001124 GO:0008289
Tpr3g4096 491 PANTHER OS06G0309200 PROTEIN 1 491 IPR045897 -
Tpr3g4096 491 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 272 476 IPR017943 GO:0008289
Tpr3g4096 491 SMART bpi1_3 34 256 IPR017942 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4096 Tpr-Chr3 45479451 45484389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4096 K05399 - gmx:100815362 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4096 3 45479451 45484389 Tpr4g0110 4 1341451 1344831 PCT