Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3315 ATGGGAGAGGAAGAAAAGAAAACAGAGGAACCAAAAACAGAGGAACCAAAAACTGAAGAAGAAACTAAGCCAGAGGAAAAACCAGAAGAACCAAAAGATGAAGCTGCTCCACCACCACCGCCACCATCAGAGATTGTGCTGAAAGTATTCATGCATTGTGAAGGCTGTGCTCGGAAAGTTCGTCGTTCGTTGAAAGATTTTCCAGGTGTTGAAGATGTGATAACAGATTGCAAATCTCATACTGTAGTTGTGAAAGGAGAGAAAGCTGATCCATTGAAAGTTGTTGAGAGAATTCAGAAAAAGAGTCATAGAAAGGTTGAAATTCTTTCCCCAATTCCAAATCCACCTGAGGCGGAGAAGATTGTAGAGGAAGAAAAGCCTGCACCTGAACAAGACAAGAAAGAAGAGGCTCAGATTGTAAGTGTTGTTCTTAAAGTTCACATGCATTGTGAAGCTTGTGCACTAGAGATGAAGAAACGTATACTGAAAATGAAGGGCGTGGAATCTGTGGAGACGGATCTGAAGAATTCGGAGGTGAGCGTCAAGGGGATGTATGATCCAGCAAGGTTGGTTGAATACATGTACAAGCGATTCGGGAAGCATTCAGTGATCATGAAGGAAGAGAAAGCGGAGGAAGAAGCAAAACCCGAGGAAGAGAAAAAAGAAGAGACGGTTGAAGAAGTGAAGGCGGAGGAGGAGAAGAAAGGAGAAGAAGAGACCGAGGCCAAACCACAAGATGAAGGTGCTGCTGCTATAGAAGAAGAGACTAAGGTGGAGGATGAGCTGAAGAAAATTGAATACTACTATAATCCACCAATGGATTTGTATGCATATCCAGCAGCAGCAATGGCATATCCTGCATACCCTCCTGCTTACTATCAAGCATATCCGCCACCAGCGCCTCAGATGTTCAGCGATGAGAATCCAAACGCCTGCAGCGTCATGTGA 948 0.4409 MGEEEKKTEEPKTEEPKTEEETKPEEKPEEPKDEAAPPPPPPSEIVLKVFMHCEGCARKVRRSLKDFPGVEDVITDCKSHTVVVKGEKADPLKVVERIQKKSHRKVEILSPIPNPPEAEKIVEEEKPAPEQDKKEEAQIVSVVLKVHMHCEACALEMKKRILKMKGVESVETDLKNSEVSVKGMYDPARLVEYMYKRFGKHSVIMKEEKAEEEAKPEEEKKEETVEEVKAEEEKKGEEETEAKPQDEGAAAIEEETKVEDELKKIEYYYNPPMDLYAYPAAAMAYPAYPPAYYQAYPPPAPQMFSDENPNACSVM* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3315 315 CDD HMA 51 107 IPR006121 GO:0046872
Tpr3g3315 315 SUPERFAMILY HMA, heavy metal-associated domain 46 101 IPR036163 GO:0046872
Tpr3g3315 315 ProSiteProfiles Heavy-metal-associated domain profile. 148 181 IPR006121 GO:0046872
Tpr3g3315 315 Gene3D - 42 114 - -
Tpr3g3315 315 Pfam Heavy-metal-associated domain 144 191 IPR006121 GO:0046872
Tpr3g3315 315 Pfam Heavy-metal-associated domain 47 101 IPR006121 GO:0046872
Tpr3g3315 315 MobiDBLite consensus disorder prediction 1 45 - -
Tpr3g3315 315 CDD HMA 143 183 IPR006121 GO:0046872
Tpr3g3315 315 Gene3D - 139 208 - -
Tpr3g3315 315 SUPERFAMILY HMA, heavy metal-associated domain 142 194 IPR036163 GO:0046872
Tpr3g3315 315 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 315 - -
Tpr3g3315 315 ProSiteProfiles Heavy-metal-associated domain profile. 51 107 IPR006121 GO:0046872
Tpr3g3315 315 MobiDBLite consensus disorder prediction 208 256 - -
Tpr3g3315 315 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 315 IPR044577 GO:0046872
Tpr3g3315 315 Coils Coil 207 241 - -
Tpr3g3315 315 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3315 Tpr-Chr3 36552439 36554418 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3315 - - gmx:100814726 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0687 3 6616054 6617957 Tpr3g3315 3 36552439 36554418 PCT