Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3298 ATGACCCTTCACCGTGAATCTTGGGCTTTTGTTTTCGGCCTTCTAGGCAATGTCATCTCCGTTATGGTCTTCCTCGCTCCATTGCCAACATTTTATCAAATCTACAAGAAAAAATCTACCGAAGGTTTTCAGTCAGTTCCTTATGTTGTTGCATTGCTAAGTGCAATGCTTTGGATATATTATGCACTTGTCAAAAATGAAGATAGCATCTTTCTCCTCACAATTAATTCATTTGGACTTGTGGTAGAATCCATTTATCTTGCAATCTTCCTAGTTTATGCCTCAAATAAAGCCAGGCTTTCAACCATCAAGCTTATTCTCTTGTTAAATGTTTTTGGATTTGGAGCAATGCTTGTTTCATCCCTCTGCTTAGCAACAGGATCAAAACGTCTTTCAATTATAGGATGGATTTGTCTAGTTTTCAACATAACCGTGTTTGCTTCTCCTCTCTGCATTATTAGACACGTAATAAAGACCAAAAGTGTGACATACATGCCGCTTAGTTTGTCCTTCTTTTTGAGCTTAAATGCTATCACGTGGTTCTTCTATGGTTATCTCCTCAAGGACTATTACATTGCTCTCCCAAATACGCTTGGATTTTTATTTGGCATAATTCAAATGGTGATGTATTTGATATATAGAAACGCCACAAAAGTGGTACTAAAGGAGCCAACAAAGTTACATGAACAAAATGGTCATATTAATATCAATATTGATGTTCTGAAGATCATTGACACAGTGGTGCTTTCTGATCCAAATCAAGTGGACAATAGTGCTGCTCTGCCTGTATCAACTACTTGTGAGGATCCAAATATGATGGAAAATAAGTAA 831 0.3694 MTLHRESWAFVFGLLGNVISVMVFLAPLPTFYQIYKKKSTEGFQSVPYVVALLSAMLWIYYALVKNEDSIFLLTINSFGLVVESIYLAIFLVYASNKARLSTIKLILLLNVFGFGAMLVSSLCLATGSKRLSIIGWICLVFNITVFASPLCIIRHVIKTKSVTYMPLSLSFFLSLNAITWFFYGYLLKDYYIALPNTLGFLFGIIQMVMYLIYRNATKVVLKEPTKLHEQNGHININIDVLKIIDTVVLSDPNQVDNSAALPVSTTCEDPNMMENK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3298 276 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Tpr3g3298 276 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Tpr3g3298 276 Gene3D - 11 99 - -
Tpr3g3298 276 PANTHER RAG1-ACTIVATING PROTEIN 1 4 261 - -
Tpr3g3298 276 Gene3D - 129 226 - -
Tpr3g3298 276 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3298 Tpr-Chr3 36316766 36321201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3298 1 259 Miscellaneous Gene Families AT5G50800 49.035 1.77e-87 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3298 K15382 - gmx:100810962 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3298 3 36316766 36321201 Tpr3g3298 3 36316766 36321201 ECH
Tpr3g0704 3 6782963 6785705 Tpr3g3298 3 36316766 36321201 PCT