Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0704 ATGGCCATGTCCCGTGAATCTTTGGCTTTTGTCTTTGGCATAATAGGCAACATCATTTCCTTTGCCGTGTTCCTCTCACCATTGCCAACATTTTACACAATCTTTAAGAAGAAATCTGCTGAAGGGTATCAGTCACTTCCATATGTTGTTGCACTTTTCAGTGCAATGCTTTGGATTTACTATGCATTTGTCAAGAGAGAAGCTGCTCTTCTTCTAATCACCATTAACACTTTTGGAATTATTGTTGAATCTGCTTACCTCATAGTCTTCCTAATTTATGCCACAAAGAAGTCTAGGCTTTCAACCATAAAACTACTTCTCTTGCTGAATGTGTTTGGATTTGGAGCCATGCTTCTATCAACTCTCTACCTCTCAAAGGGAGCAAAACGTCTTGCAATCATAGGATGGATTTGTCTTGTTTTCAACATAAGTGTATTTGCTGCACCACTTTTTGTCCTTAGTAAAGTCATAAGAACAAGGAGTGTTGAATACATGCCATTTTTCTTGTCCTTGTCCTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAGGGATTACTATGTTGCTCTACCAAATACACTTGGATTTGTGTTCGGCATAATTCAGATGGTAGTGTATTTGATATATAGAAATGCAACACCAGTGATACAGGCACCAATTAAGGGTCAAGAATTGAGTGGTAGCCATATAGTTGATGTTGTGAAGATTGGAAATGACCCTAATCGTGGAGGAGGTGCAGTTAGCAAAGTTTGA 765 0.3895 MAMSRESLAFVFGIIGNIISFAVFLSPLPTFYTIFKKKSAEGYQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIIVESAYLIVFLIYATKKSRLSTIKLLLLLNVFGFGAMLLSTLYLSKGAKRLAIIGWICLVFNISVFAAPLFVLSKVIRTRSVEYMPFFLSLSLTINAVMWFFYGLLLRDYYVALPNTLGFVFGIIQMVVYLIYRNATPVIQAPIKGQELSGSHIVDVVKIGNDPNRGGGAVSKV* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0704 254 Gene3D - 129 221 - -
Tpr3g0704 254 PANTHER RAG1-ACTIVATING PROTEIN 1 4 242 - -
Tpr3g0704 254 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 242 - -
Tpr3g0704 254 Gene3D - 10 99 - -
Tpr3g0704 254 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Tpr3g0704 254 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0704 Tpr-Chr3 6782963 6785705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0704 1 240 Miscellaneous Gene Families AT5G50800 56.432 2.14e-92 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0704 K15382 - gmx:100805676 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0704 3 6782963 6785705 Tpr3g0704 3 6782963 6785705 ECH
Tpr3g0704 3 6782963 6785705 Tpr3g3298 3 36316766 36321201 PCT