Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3297 ATGTCGTCCCACCATAGTCATCTATCTTTTGCCTTTGGAGTTCTAGGCAACATTTCATCCTTCTTTTGCTTTTTGGCACCACTACCAACATTTTATAGAGTTTGGAAGAAGAAATCAACCGAAGGTTTTCAATCAATTCCTTATGTGGCTGCACTATTCAGTGCAATGCTTTGGCTATTTTATGCCTATATGAAGACCGGTGAAACTCTTCTTATCACCATTAATGCATTCGGTTGTGTGATTGAGACAATTTATCTTGCCATTTATGTCACTTACTGCCCCAGAAAAGTTAGGATGTCGACATTGAAGATGATTGTGTTGATGAACTTTGTGGGATTTGGCGCGATTGTCGTGTTAACTCATGTCATATTTGAAGATGAAAAACAACGTATCAAGCTTCTTGGATGGATTTGTGTAGTTTTTGCTACTAGTGTTTTTGCAGCCCCTTTAAGCATTATTAGGGTTGTTATTCGCACCAAAAGTGTAGAGTTCCTTCCATTTCCTCTTTCACTTCTCCTCCTCATCAGTGCCATTATGTGGCTTTTGTATGGTATTTCTCTCAAAGATATCTATGTTACCCTCCCGAACGTTGTGGGGTTAACCTTTGGAATAGTTCAGATCACACTGTATGCAATTTACAGAAAGAGTACACCAGTAAATAATGATCAGCTACCAGAACACAAAGATGATGTTATCAACGATGAATTAGAAACAAGCAATGATGATGAGAAGAAAATCGAAGTGAAAGTTGACATAGAAATTGTGGAGAAAAAAGAAGAAGAACGTGATGATAAGGAGCAACAAGTAACTGAGGAAAAAGCAGAGGAAAAAGAAAACATTAATAGTAACAAGAAAACAGAGGAGGTAATTAAGGGTGGTTGTGAAGTTTAA 891 0.3749 MSSHHSHLSFAFGVLGNISSFFCFLAPLPTFYRVWKKKSTEGFQSIPYVAALFSAMLWLFYAYMKTGETLLITINAFGCVIETIYLAIYVTYCPRKVRMSTLKMIVLMNFVGFGAIVVLTHVIFEDEKQRIKLLGWICVVFATSVFAAPLSIIRVVIRTKSVEFLPFPLSLLLLISAIMWLLYGISLKDIYVTLPNVVGLTFGIVQITLYAIYRKSTPVNNDQLPEHKDDVINDELETSNDDEKKIEVKVDIEIVEKKEEERDDKEQQVTEEKAEEKENINSNKKTEEVIKGGCEV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3297 296 PANTHER RAG1-ACTIVATING PROTEIN 1 7 278 - -
Tpr3g3297 296 Coils Coil 255 278 - -
Tpr3g3297 296 MobiDBLite consensus disorder prediction 259 296 - -
Tpr3g3297 296 Gene3D - 127 217 - -
Tpr3g3297 296 Gene3D - 11 95 - -
Tpr3g3297 296 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Tpr3g3297 296 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016021
Tpr3g3297 296 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 7 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3297 Tpr-Chr3 36309213 36311449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3297 9 279 Miscellaneous Gene Families AT3G48740 49.462 2.50e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3297 K15382 - gmx:100810426 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0705 3 6798575 6801845 Tpr3g3297 3 36309213 36311449 ECH
Tpr3g3297 3 36309213 36311449 Tpr3g3297 3 36309213 36311449 ECH
Tpr3g0705 3 6798575 6801845 Tpr3g3297 3 36309213 36311449 PCT