Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0705 ATGACTCACAGTGACAATCCTATGATTTTCGTAGTTGGTATTCTAGGTAACATTGCCTCCTTCTTTTGCTTTATAGCACCCATATCAATATTTTACCGAATTGTTAAGAAGAAAGCAACCGATGGTTTCCAATCAGTTCCATATGTGGCTGCACTCTTCAGTGCCATGCTTTGGATATTCTATGCTTACATAAAAACGGGTGAAATGCTTATCATCACCATCAATTTATTCGGTTGTGCGATAGAAACAATTTACCTCGCCATCTATATGATTTACTGCCCCAGAAAAGCTAGGATCTTCACAGTGAAGCTGGTTTGCTTGTTAAACTTGGGTGGAATTTGCTTGGTTGTTGTTCTAACACACGTTCTAGCAAAAGAAAGAACAGCCCGTATTGAACTTCTTGGATGGATTTGTGTAGTCCTCTCTACTAGTGTTTTTGCAGCACCTTTAAGCATTATTAGAGTGGTTATTCGCACCAAAAGTGTAGAGTTTATGCCTTTCACTCTTTCACTCCTTCTCACAATAAGTGCAATTTTGTGGCTCACTTATGGTATTCTCCTCAAAGATATCTTTGTTACACTTCCGAACTTTGTGGGTATCACATTTGGAACAATTCAGATGGTATTGTATGCAATATACCGAAAAAACAAGCCTGTGAATGATGAAAAAGTAGCGGAACACAAAGAAGATATCAATGATAATCAGGTACAGGTAATAGTGATTCCTACACAAAACATGGTTGATGTTGAATTAGGGGAGAATAAGGAAGAGAAACAACATGAGAAGAAACAGGAACAAGTAGAACCAAGGGAAGGCATTGAATTACAACAACAGAAAGAGGGTTGA 846 0.3806 MTHSDNPMIFVVGILGNIASFFCFIAPISIFYRIVKKKATDGFQSVPYVAALFSAMLWIFYAYIKTGEMLIITINLFGCAIETIYLAIYMIYCPRKARIFTVKLVCLLNLGGICLVVVLTHVLAKERTARIELLGWICVVLSTSVFAAPLSIIRVVIRTKSVEFMPFTLSLLLTISAILWLTYGILLKDIFVTLPNFVGITFGTIQMVLYAIYRKNKPVNDEKVAEHKEDINDNQVQVIVIPTQNMVDVELGENKEEKQHEKKQEQVEPREGIELQQQKEG* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0705 281 Gene3D - 8 96 - -
Tpr3g0705 281 Gene3D - 128 226 - -
Tpr3g0705 281 MobiDBLite consensus disorder prediction 251 281 - -
Tpr3g0705 281 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Tpr3g0705 281 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016021
Tpr3g0705 281 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 280 - -
Tpr3g0705 281 PANTHER RAG1-ACTIVATING PROTEIN 1 5 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0705 Tpr-Chr3 6798575 6801845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0705 3 274 Miscellaneous Gene Families AT5G23660 46.377 1.17e-85 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0705 K15382 - gmx:100801430 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0705 3 6798575 6801845 Tpr3g3297 3 36309213 36311449 ECH
Tpr3g0705 3 6798575 6801845 Tpr3g0705 3 6798575 6801845 ECH
Tpr3g0705 3 6798575 6801845 Tpr3g3297 3 36309213 36311449 PCT