Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3288 ATGGAAGAACTTCCGGTGCCGGAAGTACAAATAAACGGTGGAGCAACAACTGCAACACTAAACCCTTCTGAACCTCACGGATCGAAGCGCCAACGAAGACCAAGCGTCCGATTAGGCGACATCGGAGACCAACCCTCAGATTCCCACTCTCGCCGCACCACAAAACCATGGCGATTCGGCATCAGCAACAACATCTCAGGTAAACCCTCAAAGACTCGTCCTCTCACCAATTTAACTTCCGTTTCCGATTTCGACGAAACACAAGAAGGCGAAGAAGAAGAAGACATAGAAGCCAACACCGATGGAGTAATCATTGGTAGCTGGAAAGTTAAAAAAGGTTCGAAAAGACCTCGATCGAATTGGATTTCTTCACGAATCGATAAAGGCGAAGAAACTGTTGATAATGATAATGATAATGATGATGTTTATGAAGATTTTGAAGGTGATAATTCGGGTAGATCAATTCATTCTTCAGAGAATTTGGGGGATTTTGATGTTAGGGATAGAAATGAAGATGGTGGAAGAGGTAGTTGTGGTGAAGATGGTGTTAGAATTTGGCTTAATGGATTAGGTTTAGGTCGTTATGCACCTGTTTTTCAAATTCATGAAGTTGATGATGAAGTTTTACCTTTGTTAACACTTGAGGATCTTAAAGATATGGGTGTTAATGCTGTTGGTTCTAGAAGGAAATTGTATTGTGCAATTCAAAAGCTTGGGAAGGGATTCTCTTAA 732 0.4139 MEELPVPEVQINGGATTATLNPSEPHGSKRQRRPSVRLGDIGDQPSDSHSRRTTKPWRFGISNNISGKPSKTRPLTNLTSVSDFDETQEGEEEEDIEANTDGVIIGSWKVKKGSKRPRSNWISSRIDKGEETVDNDNDNDDVYEDFEGDNSGRSIHSSENLGDFDVRDRNEDGGRGSCGEDGVRIWLNGLGLGRYAPVFQIHEVDDEVLPLLTLEDLKDMGVNAVGSRRKLYCAIQKLGKGFS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3288 243 MobiDBLite consensus disorder prediction 55 84 - -
Tpr3g3288 243 ProSiteProfiles SAM domain profile. 181 241 IPR001660 GO:0005515
Tpr3g3288 243 Gene3D - 178 238 IPR013761 -
Tpr3g3288 243 SUPERFAMILY SAM/Pointed domain 180 238 IPR013761 -
Tpr3g3288 243 MobiDBLite consensus disorder prediction 1 100 - -
Tpr3g3288 243 PANTHER PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE 152 243 - -
Tpr3g3288 243 PANTHER PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE 19 152 - -
Tpr3g3288 243 MobiDBLite consensus disorder prediction 85 99 - -
Tpr3g3288 243 CDD SAM_superfamily 183 237 - -
Tpr3g3288 243 PANTHER SCP160 19 152 - -
Tpr3g3288 243 PANTHER SCP160 152 243 - -
Tpr3g3288 243 SMART SAM_4 175 241 IPR001660 GO:0005515
Tpr3g3288 243 Pfam SAM domain (Sterile alpha motif) 182 238 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3288 Tpr-Chr3 36222209 36223588 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3288 - - mtr:MTR_3g498865 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0711 3 6834799 6836052 Tpr3g3288 3 36222209 36223588 ECH
Tpr3g3288 3 36222209 36223588 Tpr3g3288 3 36222209 36223588 ECH