Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0711 ATGGCGGAGATTCAGCCGGCAGAGGGGCAGATAAACGGTGGCGGAACCCTAATTTTGAACTCTACCGAACCAATTGGAACAAAGCGCCAGAGAAGACCAAGTGTTAGATTGGGCGACATCGGCGTCGACCCACCTTACGATTCTCATGCCCGACGCAATAACAAGAGTTGGAAACTCGCCTTCGATCACCCACGCAAGGAAAAAGATTCAAACGCTTCAGGTAAACCTTCAAAGACTCGACCTTTAACTAATTTGAGTACTATTGCTGATTTCAACCAAACCCTAGATGGTCATGAAAGAGAAGGGAATATTGATACTACTGTTGCAATTGGTAGCTGGAAGGTTAAAGAATCTAAGAAAAGAGGTTCTGTTGCCACCAAGAGAGTTAGATCGAATTGGGTTTCGAGAATTGATGAAACTGGTGGTGGCGGTATTGGCGCCGGTGTTGTTGAATTAGAGGAAAAGTATAGTGGTGCTGAAGATATTGATGATGGATATAGAGAATTCGATGTGGAAAATTCGGAAAGTCCTTTGAAAGAACAAAGCCCTATTCATTCAATGGAGAATTTAGGGCTTGATGGGCATAGAAGGTCTTTTAAGGGTAGGGATCATCATGATGGAATTGAGTTATCTGGGCCATCTGAAAATGATGTTAGAAATCAGAATGATGGGAGGATTAGGTGTGGAGAAGATGGGATTAGGATTTGGCTTAATGGATTGGGATTAGGTCGTTATGCGCCCGTGTTTGAAGTGCATGAAGTTGATGATGAAGTTTTGCCAATGTTGACATTAGAAGATCTCAAAGATATGGGAATTAATGCTGTTGGATCCAGAAGAAAATTGTATTGTGCTATTCAGAAGCTTGTACTAGCAGGGAAGAAAAGGATTCTCAGCCATAGCATAATTCAGATGCATGTCTGA 921 0.4235 MAEIQPAEGQINGGGTLILNSTEPIGTKRQRRPSVRLGDIGVDPPYDSHARRNNKSWKLAFDHPRKEKDSNASGKPSKTRPLTNLSTIADFNQTLDGHEREGNIDTTVAIGSWKVKESKKRGSVATKRVRSNWVSRIDETGGGGIGAGVVELEEKYSGAEDIDDGYREFDVENSESPLKEQSPIHSMENLGLDGHRRSFKGRDHHDGIELSGPSENDVRNQNDGRIRCGEDGIRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGINAVGSRRKLYCAIQKLVLAGKKRILSHSIIQMHV* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0711 306 MobiDBLite consensus disorder prediction 45 74 - -
Tpr3g0711 306 PANTHER - 25 288 - -
Tpr3g0711 306 MobiDBLite consensus disorder prediction 1 83 - -
Tpr3g0711 306 SUPERFAMILY SAM/Pointed domain 231 289 IPR013761 -
Tpr3g0711 306 CDD SAM_superfamily 236 287 - -
Tpr3g0711 306 PANTHER SCP160 25 288 - -
Tpr3g0711 306 ProSiteProfiles SAM domain profile. 236 291 IPR001660 GO:0005515
Tpr3g0711 306 Pfam SAM domain (Sterile alpha motif) 235 288 IPR001660 GO:0005515
Tpr3g0711 306 Gene3D - 228 288 IPR013761 -
Tpr3g0711 306 SMART SAM_4 225 291 IPR001660 GO:0005515
Tpr3g0711 306 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0711 Tpr-Chr3 6834799 6836052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0711 - - aprc:113856178 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0711 3 6834799 6836052 Tpr3g3288 3 36222209 36223588 ECH
Tpr3g0711 3 6834799 6836052 Tpr3g0711 3 6834799 6836052 ECH