Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3209 ATGGAACGAAGGAGTTGGATGTGGCACAGTAAGTCATTTGAGAAAAGTTCTGCTCAAACTGATGAGACTTCTGAATCATTATATGATGATAATCAGGAATATGCAACTCAAACTGCTCCATTTCCGGAAGTGATGTCCAAAGCTGCATCAAATGAAGAGGTTGTTACTGATGTGGATACTCTAACAGAAAAATTATCTGCTGCTCTCTTAGACATTAGTGCCAAAGAAGAACTGGTAAAGCAGAATGCCAAAGTTGCTGAAGAAGCTGTCTCAGGCTGGGAGAAGGCTGAAAATGAAGTATTGACTTTAAAACAAGAACTTGACGTTGCAAAACAGAAGAATGCGGTTCTTGAAGACCAAATTAGTCATCTTAATGAGGAATTAAAGAATTGTATGAGGCAGCTTCGACAAGCTAGAGAAGAGAAAGAGCAAAATATCCATGAACCTGTTGCAAATACCTCTTGTAATTGGGAATCCGAAAGACCCGATTTTGAGTGGAAAGTTGCTGAGCTTGAGGCTCAACTTCAAACAGCTAAAGAAGACGCTGCTACATCAGTTAATTCTGGTCTTCTGCAGAGGCTTGAGGATGTGGAGAGGGAGAATTCAAGTCTTAAAATTGAACTGCAATCTCGACTCGAGGAACTAGAATTCAAAACCTTTGAAAGGGATTTGAGTACCGAAGCTGCCGAAACAGCAAGCAAGCAACATTTGGAGAGTATAAATAAGGTGGCTAAACTTGAAGCTGAGTGCCGGAGACTTAATGCCATGGCTCGCAAGACATTCTCTGCTAACGATCGCAGATCATTGACTTACTCTTCAGTTTGCGCAGAGTCTTTCACAGATAGCATGTCAGATAGTGGAGAGAAGCTATTGGTGGTTGAAAATGATATGCACAAGTTTGGAGGCTGGGAGACAAATGAAGGTGAACCAAAGCATTATGACTCATGGCCATCTGCTTCAATTACAGAATCAGATCAATTTAAGAATGAAAACACCACTGCACAAAATCGTATAGGCCTTTCATCTCAGACCGATCTGATGGATGATTTCCTTGAAATGGAAAGGCTTGCGGCATTGCCAGATACAGAAAGTGTAAGCAGTTTCTTTGTGGTAAATACTGGAACAGACACAATGAATGCTGAAGTGGAAGCATTGGTTCAAAAGAATGCTGCATTGGAGAATAAGCTAGCGAAAATGGAGGCAGATAAATTCGAGCTAGAGATGGATTTAAACGAGTGCCAGAAACAGCTCGAGGCATCACAAAGTCGGTTAAAGGAAGTGGAGTTGGAGGTAATTGAGCTTCAAAATCAATTATCTCTTGCAAATAAATCAAATGAAGAAGCATATGAAGAACTAAAAGCAGCCCAAATAAAGAATGAGAAAGCTGAATCAAAACTGAGAGCTGCTCAAACTGAGGCAGAAGAATTGATCTCAAAAATTTGTTCACTGGAGGAAGAGATTGAAAAAGAGAGGGCTTTGTCTGCTGAGAATTTGGCCGAGTGTGAAAAGTTGGAAGATGAGCTTTTGAGAATGAAGCAAGAGACTCAACTCCAGCAAGACACTAAAATACTGCACAGGGAAGGTGTTGATACTGAGTTAATGTTCAAGCAGGAGAAGGAATTGGCATTGGCTGCTAGTAGATTTTCCGAGTGCCGGAAAACCATTGAATCTCTAGGACAGCAGTTGAAGTCCCTTGCAACATTGGAAGACTTCCTCCTTGATTCTGAGAATAATGTGGAGTTAAGTAGTGATCTTACACCACATGACCCCCAAGATGGTGGTGAGCAATTTAAATTACATAATAGCGATTTGAGTTCACTGGAAAGAGATTCTGAATCGCCAACTTCGCTAAATCTATCTAGCTTTGGAAAAAGCCACTTTAGTTTTGGTAGGTTCTATTCTACAAAGGCTTAA 1914 0.407 MERRSWMWHSKSFEKSSAQTDETSESLYDDNQEYATQTAPFPEVMSKAASNEEVVTDVDTLTEKLSAALLDISAKEELVKQNAKVAEEAVSGWEKAENEVLTLKQELDVAKQKNAVLEDQISHLNEELKNCMRQLRQAREEKEQNIHEPVANTSCNWESERPDFEWKVAELEAQLQTAKEDAATSVNSGLLQRLEDVERENSSLKIELQSRLEELEFKTFERDLSTEAAETASKQHLESINKVAKLEAECRRLNAMARKTFSANDRRSLTYSSVCAESFTDSMSDSGEKLLVVENDMHKFGGWETNEGEPKHYDSWPSASITESDQFKNENTTAQNRIGLSSQTDLMDDFLEMERLAALPDTESVSSFFVVNTGTDTMNAEVEALVQKNAALENKLAKMEADKFELEMDLNECQKQLEASQSRLKEVELEVIELQNQLSLANKSNEEAYEELKAAQIKNEKAESKLRAAQTEAEELISKICSLEEEIEKERALSAENLAECEKLEDELLRMKQETQLQQDTKILHREGVDTELMFKQEKELALAASRFSECRKTIESLGQQLKSLATLEDFLLDSENNVELSSDLTPHDPQDGGEQFKLHNSDLSSLERDSESPTSLNLSSFGKSHFSFGRFYSTKA* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3209 637 MobiDBLite consensus disorder prediction 587 618 - -
Tpr3g3209 637 MobiDBLite consensus disorder prediction 591 607 - -
Tpr3g3209 637 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 635 - -
Tpr3g3209 637 Coils Coil 375 479 - -
Tpr3g3209 637 MobiDBLite consensus disorder prediction 19 39 - -
Tpr3g3209 637 Coils Coil 93 148 - -
Tpr3g3209 637 Coils Coil 487 521 - -
Tpr3g3209 637 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 635 - -
Tpr3g3209 637 Pfam Filament-like plant protein, long coiled-coil 386 567 IPR008587 -
Tpr3g3209 637 Pfam Filament-like plant protein, long coiled-coil 75 181 IPR008587 -
Tpr3g3209 637 Pfam Filament-like plant protein, long coiled-coil 175 259 IPR008587 -
Tpr3g3209 637 MobiDBLite consensus disorder prediction 1 18 - -
Tpr3g3209 637 Coils Coil 161 214 - -
Tpr3g3209 637 Gene3D - 388 486 - -
Tpr3g3209 637 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3209 Tpr-Chr3 35241962 35245599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3209 - - gmx:100810372 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3209 3 35241962 35245599 Tpr3g3209 3 35241962 35245599 ECH
Tpr3g0779 3 7441071 7445496 Tpr3g3209 3 35241962 35245599 ECH