Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0779 ATGGACCGGAGGAGTTGGTTATGGCGTAGGAAGTCGTCTGAGAAAAGTCCAGGCGAAACGGAGAGTTCAGGATCATTATCATCTCTCTCAGAAAGATTTTCTGATGATCAGGCATATCCAAGCCAAGCTACTCTATCACCAGAGGTCACATCTAAGGCTGCACCAAATGAAGAAGTTGGTACACCGAAAAAATATAAAGAAGACTTTATTGACGTGAAGACTCTTACGAACGAATTAGCTGCAGCTCTGCTAGATATTAGTGCCAAAGAAGATTTGGTAAAGCAGCATTCTAAGGTTGCTGAAGAAGCTGTCTCAGGTTGGGAGAAGGCTGAAAATGAAGCATTGTCTTTAAAACAACAACTTGATGCTGCAAGGCAGAAGAATTCAGGTCTTGAAGACCGAGTTAGCCACCTTGACGGGGCACTCAAAGAGTGTATGAGGCAGCTTCGCCAAGCTAGGGAAGTGCAAGAGCAAAAGATCCATGAAGCCATTGCAAATAATTCTCATAACTCGGAATCTAAAAGATTTGAACTTGAGAGAAAAGTTGCTGAGCTTGAAGCTCAACTTCAAACATCAAAAGCAGATGCTGTTGCATCTATTCGTTCCGATCTTCATAGGAAACTCGAGACTGTGGAGAAGGAGAATTTGAGTCTTCAGCTTGAGCTACAATCTCGACTTGAGGAACTAGAATTCAGGATAGCAGAGAGGGATTTGAGTTCCCAAGCTGCTGAAACAGCTAGTAAACAAAACTTGGAGAGCATAAAAAAGATTGCTAAGCTTGAAGCTGAGTGCCGTAGACTGAAAGCCATGACTCGTAAAACATTTAATTTGAATGATAACAGATCTTTGACCACATCTTCAGTTTATATCGAGTCCTTCGCAGATAGCATGTCAGATGGTGGAGAGATGAATGAATATGAACCAAGCTGTTCCGATTCATGTTCATCTGCATTAATTTCTGAACTTGATCAATTAAAGAATAAAAAGACTACTGGAAAAAATCATATTGCGCATGCGACTTCAACCGAGATCAATCTCATGGATGATTTCCTTGAGATGGAAAGGCTCGCTGCCTTGCCAGATACAGAAAGGGGAAGCCATTATGCTAATGGAGGACGAGCATCTGATCAATTTATTGTTGGTCACAGTACAATGGAAGCTGAAGTGGAAGCTATGATTCAAAAGAACGCAGAGTTGAAAAAGAAGCTGGAGAGAATGGAGGAAGATAAACTTAAGGTAGAGATGAGTTTAACTGAGTGCCAAATGCAGCTTGAGACCTCAGAGAGTCGGATAAGGGCAGCAGAGTTGAAGGTAGAAGAGCTTCAAACTCAGTTGGCTCTAGCAAACAAATCAAATCAAGAAGCATATGAAGAACTAAAAGAAACCAAAACAAAGAAGGATATAGTTGAGTTGAAACTCAAAAATGCTCAAACTGAGGTAGAAGAACTAATTTCAAAAATCCATTCATTGGAGGAAGAGATTCAGAAGGAGCAAGCTTTGTCTGCTGAGAATTCGATCAAAAGCAAGAAGTTGAAGGACGAGCTTTCAAGAATGAAACATGAAGCTCAACTTCAGCAAGACACCAAGACTTTGCAGAAGGAAAGTGTTAATCGCGATTTGAAGTCAAAACAGGATAAAGAACTTGCATTAGCTACTAGCAGATTTGCTGAATGTCAAAAAACCATTGCATCTCTTGGGAAGCAGTTGAAGTCTCTTGCAACATTGGAAGACTTTCTGCTTGATTCAGACAACAACCCCATGGAGTTAAAATGTGAAGTTATTGCACATGATCCTCCTCAAAAGGAAGGTGAAAAGTTGAAAGTAGTAAATCATAGTGATTTGAGTTTGGTTAAAAGAGATTCATCATTAAACTCATCTATTACCAATGAGAAAAGTCGTAATGGATTTGGTAAGTTGATACCAAGAAGCAAGAGTGTTAGCAGAATTCGTTGA 1953 0.4014 MDRRSWLWRRKSSEKSPGETESSGSLSSLSERFSDDQAYPSQATLSPEVTSKAAPNEEVGTPKKYKEDFIDVKTLTNELAAALLDISAKEDLVKQHSKVAEEAVSGWEKAENEALSLKQQLDAARQKNSGLEDRVSHLDGALKECMRQLRQAREVQEQKIHEAIANNSHNSESKRFELERKVAELEAQLQTSKADAVASIRSDLHRKLETVEKENLSLQLELQSRLEELEFRIAERDLSSQAAETASKQNLESIKKIAKLEAECRRLKAMTRKTFNLNDNRSLTTSSVYIESFADSMSDGGEMNEYEPSCSDSCSSALISELDQLKNKKTTGKNHIAHATSTEINLMDDFLEMERLAALPDTERGSHYANGGRASDQFIVGHSTMEAEVEAMIQKNAELKKKLERMEEDKLKVEMSLTECQMQLETSESRIRAAELKVEELQTQLALANKSNQEAYEELKETKTKKDIVELKLKNAQTEVEELISKIHSLEEEIQKEQALSAENSIKSKKLKDELSRMKHEAQLQQDTKTLQKESVNRDLKSKQDKELALATSRFAECQKTIASLGKQLKSLATLEDFLLDSDNNPMELKCEVIAHDPPQKEGEKLKVVNHSDLSLVKRDSSLNSSITNEKSRNGFGKLIPRSKSVSRIR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0779 650 Coils Coil 382 500 - -
Tpr3g0779 650 Pfam Filament-like plant protein, long coiled-coil 389 574 IPR008587 -
Tpr3g0779 650 Pfam Filament-like plant protein, long coiled-coil 89 196 IPR008587 -
Tpr3g0779 650 Pfam Filament-like plant protein, long coiled-coil 188 273 IPR008587 -
Tpr3g0779 650 Pfam Filament-like plant protein, long coiled-coil 291 362 IPR008587 -
Tpr3g0779 650 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 641 - -
Tpr3g0779 650 Coils Coil 201 228 - -
Tpr3g0779 650 Coils Coil 508 528 - -
Tpr3g0779 650 Coils Coil 107 134 - -
Tpr3g0779 650 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 641 - -
Tpr3g0779 650 Coils Coil 243 270 - -
Tpr3g0779 650 MobiDBLite consensus disorder prediction 18 51 - -
Tpr3g0779 650 Coils Coil 168 195 - -
Tpr3g0779 650 MobiDBLite consensus disorder prediction 1 17 - -
Tpr3g0779 650 MobiDBLite consensus disorder prediction 1 66 - -
Tpr3g0779 650 Coils Coil 138 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0779 Tpr-Chr3 7441071 7445496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0779 - - gmx:100796048 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0779 3 7441071 7445496 Tpr3g0779 3 7441071 7445496 ECH
Tpr3g0779 3 7441071 7445496 Tpr3g3209 3 35241962 35245599 ECH