Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1475 ATGCATAGTTTCCATAAAGAAAAAAACTTCTTCATGGAAGGTTTTCACCCTTCAATGAATATGAGCATGAGTAGTATGAACCCTTCTTTTTCATACACTTTTCCTATCACTGGTTCTTCTGCCATAACCAACAACATTCCTACTGCTACATACATCACCACTAGTAACACTACTCCATGGATGAACAGCAGAATATGGAGTAAGCTTCCACAAAGATTACTTGATCGTATCATAGCTTTTCTTCCTCCACCTGCTTTCTTCCGTGCACGTTCTGTTTGCAAGAGATTCTATTCTCTTCTTTTCTCAAACACTTTTCTTGAACTATATCTTCAAGTTTCACCTCGTTTTCACTGGTTTTTGTTCTTCAAACACAAAACCAAATCAAAAACCAACATCTACAAAAACAGCATAACTGATCCTAATAATAACAACTCTTTTGAAGGTTACATCTTTGATCCTAATGAAATGACTTGGTACCGTATTTCATTTGGTTTAATCCCTTCTGGTTTTTCACCATCTTCATCATCCTCTGGTTTACTCTGTTTTGTTTCTGATGAATCTGGTCCAAAAACAATGCTTTTATGTAACCCTTTACTTGGTTCAATAACTCAGTTACCACCAACTTTGCGTCCAAGACTTTTTCCTTCATTAGGCTTAACAATTACTCCATCTTCCATTGATGTTACTGTTGCTGGTGATGATATGATATCACCATATGCAGTTAAAAACTTAACTTCTGAAAGCTTTCATATTGATGCAAGTGGGTTTTATTCAATGTGGGGAACAACTTCATCATTACCAAGATTATGTAGTCTTGAATCAGGTAGAATGGTTTATTCAAATGGAAAATTTTACTGCATGAATTCAAGTCCTTTTAGTGTTTTAGCTTATGATGTTGTAACAAACACATGGTTCAAAATTCAAGCACCTATGAGAAGATTCTTAAGATCACCAAATCTTGTTGAATGCAAAGGAAAGTTGTTACTTGTTGCAGCTGTTGAAAAAAGTAAGCTGAATGTTCCTAAGAGTTTGAGGGTTTGGTGTTTACAAAGCTGTGGAAGTGTTTGGTGTGAAACTGAGAGAATGCCACAGCAACTTTATGTTCAATTTTCTGAGATGGAAAATGGGAATGGTTTTGAGTGTGTTGGAAATGGTGAGTTTATTGTGATTATGATTAAGGGAAGTGATAAAGGTTTGGTTTATGATATTGGAAGGAAAAGATGGCAATGGATTCCAACTTGTCCTTATGCTGGTTATGATGGATTTGAGTTGCATGGTTTTGCTTATGAACCTAAGTTGGCTACACCTGTTACTGCTCTTCTTGATCAATTGGTTATGCCTCTTCCACAGTTTTAG 1356 0.3584 MHSFHKEKNFFMEGFHPSMNMSMSSMNPSFSYTFPITGSSAITNNIPTATYITTSNTTPWMNSRIWSKLPQRLLDRIIAFLPPPAFFRARSVCKRFYSLLFSNTFLELYLQVSPRFHWFLFFKHKTKSKTNIYKNSITDPNNNNSFEGYIFDPNEMTWYRISFGLIPSGFSPSSSSSGLLCFVSDESGPKTMLLCNPLLGSITQLPPTLRPRLFPSLGLTITPSSIDVTVAGDDMISPYAVKNLTSESFHIDASGFYSMWGTTSSLPRLCSLESGRMVYSNGKFYCMNSSPFSVLAYDVVTNTWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWCLQSCGSVWCETERMPQQLYVQFSEMENGNGFECVGNGEFIVIMIKGSDKGLVYDIGRKRWQWIPTCPYAGYDGFELHGFAYEPKLATPVTALLDQLVMPLPQF* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1475 451 Gene3D - 61 106 - -
Tpr3g1475 451 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 66 434 - -
Tpr3g1475 451 SUPERFAMILY F-box domain 59 134 IPR036047 GO:0005515
Tpr3g1475 451 Pfam F-box domain 66 100 IPR001810 GO:0005515
Tpr3g1475 451 SMART fbox_2 69 109 IPR001810 GO:0005515
Tpr3g1475 451 PANTHER F-BOX/KELCH-REPEAT PROTEIN 66 434 - -
Tpr3g1475 451 SUPERFAMILY Galactose oxidase, central domain 142 419 IPR011043 -
Tpr3g1475 451 Gene3D - 122 420 IPR015915 GO:0005515
Tpr3g1475 451 ProSiteProfiles F-box domain profile. 63 112 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1475 Tpr-Chr3 13191416 13193210 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1475 - - cam:101505902 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4654 2 51833216 51837186 Tpr3g1475 3 13191416 13193210 PCT