Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4654 ATGGAAGGCCTGGCCATGCTCAAGTACCTCATTTCTCAGCTTCACCAACTCTTCCACGATTCTTCTTCCATACTTCTTCAACAACAACAACCTTCTCTTCCCACCACCATCTTCCTCCACCCTCCTCCTCCCACTACCACCAGATGGACCTCCTTTGATAGTGAAGAAGATAGCTCTGTAGATGACTGTTGTGACCTTGTAATGGCAGCTGGAAAGTCTCATAGTTTCAGGATATCGGAGCCTCTAAAGCCTCCACCCGCTAAGAAGCCTCGAAAAGATCGAAGTAGGGGCAAATCGTTAGGAAGATCCTGTTCAAGTGAAGTTATGGAACAAGAAATCTGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTAATTGCACGACTTCCCATTGCGGCATTTTTCCGCTTCCGCTCTGTGTGCCGTCAATGGGATTCTTTGCTGGCTTCTCAAAGCTTTTCTCAGCACTGTGCCCAAGTCCCACAAGAAAATCCATGGTTTTACACCATAACCCATGAAAATGTGAATTCAGGAGCCATGTATGATCCTTCTTTGAAAAAGTGGCATCACCCATCTATATCACCACTGCCCACAAAGTTGATCGTTTTGCCAGTGGCTTCAGCAGGGGGTTTAGTTTGCTTTCTTGACATTGGCCACCGTAACTTCTATGTGTGTAACCCGCTGACTCAATCCTTCAAGGAATTGCCAGCTCGGTCGGTTAAGGTCTGGTCTCGCGTTGCTGTAGGGATGACGGTAAATGGAAATTCAGCTGGTTCAGGCTACAAGATCCTATGGGTTGGTTGCAATGGAGAGTATGAAGTTTATGACTCAGTGAAAAACTCTTGGAATCGTCCAGGAAACATCCCTGGAAGTGTGAAGCTGCCATTGTCCCTTAACTTTAGGTCACAAGCTGTCGCTATTGACAGCACGCTTTACTTCATGCGTTCAGATCCAGAAGGGGTTGTTTCCTATGATGTGGCAACAAGGGTTTGGACACAGTACATAATCCCAGCGCCGCTGCATCTGACTGATCACACTCTGGCTGAGTATGATGGTCAGATCATGCTTGTGGGGTTGCTCACAAAGAATGCAGCCACGTGCGTGTGCATATGGGAGCTGCAGAAAATGACACTCTTGTGGAAGGAGGTAGACAGAATGCCAAATATATGGTGCTTGGACTTTTATGGTAAGCACGTTAGAATGACTTGCCTGGGGAACAAAGGCTTGCTCATGTTGTCCTTGAGATCAAAACAAATGAATAGGTTGGTTACTTACAACATAGCTAGGAAGGAATGGCTGAAGGTTCCCGGATGTGTGGTACCGCATGGGAAGAAACGGCAGTGGATAGCATGTGGCACTGCATTTTATCCATGCCTGACTGCTGTGGCTTGA 1392 0.467 MEGLAMLKYLISQLHQLFHDSSSILLQQQQPSLPTTIFLHPPPPTTTRWTSFDSEEDSSVDDCCDLVMAAGKSHSFRISEPLKPPPAKKPRKDRSRGKSLGRSCSSEVMEQEIWKDFPEDLFEAVIARLPIAAFFRFRSVCRQWDSLLASQSFSQHCAQVPQENPWFYTITHENVNSGAMYDPSLKKWHHPSISPLPTKLIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTVNGNSAGSGYKILWVGCNGEYEVYDSVKNSWNRPGNIPGSVKLPLSLNFRSQAVAIDSTLYFMRSDPEGVVSYDVATRVWTQYIIPAPLHLTDHTLAEYDGQIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIARKEWLKVPGCVVPHGKKRQWIACGTAFYPCLTAVA* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4654 463 PANTHER BNAA07G08860D PROTEIN 46 462 - -
Tpr2g4654 463 MobiDBLite consensus disorder prediction 78 104 - -
Tpr2g4654 463 Gene3D - 114 153 - -
Tpr2g4654 463 SUPERFAMILY F-box domain 109 196 IPR036047 GO:0005515
Tpr2g4654 463 SUPERFAMILY Galactose oxidase, central domain 178 442 IPR011043 -
Tpr2g4654 463 PANTHER F-BOX/KELCH-REPEAT PROTEIN 46 462 - -
Tpr2g4654 463 SMART fbox_2 117 157 IPR001810 GO:0005515
Tpr2g4654 463 Gene3D - 160 449 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4654 Tpr-Chr2 51833216 51837186 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4654 - - gmx:100810179 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4654 2 51833216 51837186 Tpr2g4654 2 51833216 51837186 ECH
Tpr2g4654 2 51833216 51837186 Tpr3g1475 3 13191416 13193210 PCT