Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1307 ATGACCACCACCAAACAGAGTGATGGTAATAATGATGATGAAGAACTTAAGCATCTTGGGTTTGTGAAAATTGCTGCTATTCAAGCTTTTGTTTGCATGTCAAGTCTTTATGATTATGCAAAACAGAATTCAGGTCCTTTGAGATCTGCTGTTTGTACCGTTGAAGGTACTGTCACTACCGTTCTTGGTCCTGTTTATCACAAATTCAAGCCTCTCCCTCAAGATCTTCTTGTTTTTTTCGACAACAAGGTGGATGAAGCAACCAAAAAATTCGACGAGCATGCTCCGCCTTTTGCGAAACAAGTTGCCAACCAAGCTAAAGATTTGATTCAAGAAGTAACACACAAAGCTGAGAAAACTGTGAAAGAAGCTCAATCTGGTGGAGCAAAAGCAGCTGCAAATTATGTAGCTACAGAATCAAAACAAATAGTTCTAACAGGTTCAGTTAAACTATGGTCAGGTCTTAACCACTATCCACCATTTCATGCAGTGGCAGAATTAGCAGTTCCAACAGTTGCACATTGGTCAGAAAAGTATAACCATGTTGTTAAGGACATTAGTGGAAAGGGTTATGCTGTGGTTGGATATTTGCCTTTGATTCCTATTGATGAAATAGCTAAGGCATTTAAACAAGGAGAAGGTAAGGTTCGTGCAGGTCATGAAAAAGCTTCTAAGAAAGATGTTTCTGATGAGGTTGGATCTTCTCCTGCCATCGCTCTCCAACCTTCAAAAATATATGTGCAGTAG 747 0.3949 MTTTKQSDGNNDDEELKHLGFVKIAAIQAFVCMSSLYDYAKQNSGPLRSAVCTVEGTVTTVLGPVYHKFKPLPQDLLVFFDNKVDEATKKFDEHAPPFAKQVANQAKDLIQEVTHKAEKTVKEAQSGGAKAAANYVATESKQIVLTGSVKLWSGLNHYPPFHAVAELAVPTVAHWSEKYNHVVKDISGKGYAVVGYLPLIPIDEIAKAFKQGEGKVRAGHEKASKKDVSDEVGSSPAIALQPSKIYVQ* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1307 248 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 9 228 IPR008802 -
Tpr3g1307 248 Pfam Rubber elongation factor protein (REF) 11 211 IPR008802 -
Tpr3g1307 248 MobiDBLite consensus disorder prediction 216 235 - -
Tpr3g1307 248 Coils Coil 103 123 - -
Tpr3g1307 248 PANTHER RUBBER ELONGATION FACTOR-RELATED 9 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1307 Tpr-Chr3 11561591 11563830 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1307 - - gmx:100499806 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1307 3 11561591 11563830 Tpr3g1307 3 11561591 11563830 ECH
Tpr2g4665 2 51998583 52001377 Tpr3g1307 3 11561591 11563830 PCT