Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4665 ATGACTACTAAAGAGATGGATGCGAAGGTTGAAAATCAGAACAGAGAACTAAAGCGTTTAGGGTTTGTGAAGATTGCTGCTATTCATACTTTCGTGTTTGTTTCATATCTGTATGAATCTGCTAAGAAGAACTCAGGGTCTTTGAGATCCGCTGTTGAAACTGTGGAGGGATCTGTAACAACTGTTATTGGTCCTGTCTACAACAAATTCAAGGGTGTCCCTGATGAGGTCCTGGTTTTTGTTGACAACAAGGTTGATGAAGCTACTCACAAGTTCAATGAGCATGCTCCTCATATTGCTAAGCAGCTGGCGGATCAATCCAAAAGTTTGATTCAGAAAGTATCATATGAGGCAGGGAAAGTTGTGAGTGTCGGTCGATCTGCAGGACCAAGAGCAGCTGTAGATTATGTTGCTACAGAGTCCAAGAATTTGCTGCTAATCAATTCAGTGAAGCTCTGGACTGTACTCAACCAATTTCAACCATTCCATGCTGTGGCAGAGATGGCAATTCCCACTGCTGCTCACTGGTCTGAGAAATACAACCATACAATCAAGGCCATGGCTGAAAAGGGTTATAGTTTTGTTGGTTATTTACCTTTGATTCCTATTAATGATATATCTAAGGCATTTAAGCGGGGAGAAGTTAAGGAAAAGAAATCAGCATAA 666 0.4114 MTTKEMDAKVENQNRELKRLGFVKIAAIHTFVFVSYLYESAKKNSGSLRSAVETVEGSVTTVIGPVYNKFKGVPDEVLVFVDNKVDEATHKFNEHAPHIAKQLADQSKSLIQKVSYEAGKVVSVGRSAGPRAAVDYVATESKNLLLINSVKLWTVLNQFQPFHAVAEMAIPTAAHWSEKYNHTIKAMAEKGYSFVGYLPLIPINDISKAFKRGEVKEKKSA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4665 221 Pfam Rubber elongation factor protein (REF) 12 211 IPR008802 -
Tpr2g4665 221 PANTHER RUBBER ELONGATION FACTOR-RELATED 2 220 - -
Tpr2g4665 221 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 2 220 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4665 Tpr-Chr2 51998583 52001377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4665 - - mtr:MTR_3g085370 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4665 2 51998583 52001377 Tpr2g4665 2 51998583 52001377 ECH
Tpr2g4665 2 51998583 52001377 Tpr3g1307 3 11561591 11563830 PCT