Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1306 ATGAGAACAAGAAGAGGGAGTTATTACCCAGAATCTGGAATAGTGACAAAGATGTGTTCATTTGGTAATAAGAGAAAACCAAAAGAGACTATTTCATATGCAAAGAGACAGAAGAAATGTTCTGAGAAACCAACAACAACAACAACGGATTATGATTTTTTTGAATCTTTACCAGATGACATCGTTATTTCTATCTTCTGTAGGCTTAGTTCTACAGCCACTTCCCCTTCAGATTTTGTAACCGTTTTATTAACGTGTAAGAGATTAAAAAGTTTAGCACTTCATTCTCTTGTGTTATCAAAAGCTTCTCCGAGAACTTTCTCCATTAGAGCAAAAAATTGGTCCGATTCTGCACAAAAATTTCTCAAAAACTGTGCCGAAGCAGGGAATGTTGAAGCGTGTTATACTTTAGGCATGATTCGGTTTTACTGTTTGCAAAACAGAGGGAGCGGTGCTTCGCTTATGGCGAAAGCAGCAATGAATTCACACGCGCGTGCTCTTTACTCGCTTGCAGTTATACAGTTCAACGGCAGCGGCGGTACCAAAAGTGACAAAGACCTCCGTGCCGGAGTTGCTCTCTGCGCTAGAGCCGCTTTTCTCGGCCACATCGACGCGTTGCGTGAGCTTGGCCACTGTTTACAAGACGGTTACGGTGTTAAACAGAATATCTCCGAGGGAAGACGTTTTCTTATTCAAGCAAACGCACGTGAACTCGCCGCCGTGTTATCAACCAACGCCGCCGCGCGCCAGTTAGTTAATTCAAATCTCCAGTCACAGCTTCGATATGTTGCGGCGACTGGATGTCCGTTGTTAAGTGATTTTGGATGTAATGTCCCGGCGCCGGAGCCACATCCGGCGAGTCGGTTTTTGACGGAGTGGTTCACGGTTCGGAGTGATTCGCTTGATTCGGGTTTGAGACTCTGTTCACATGCCGGATGTGGTAGACCGGAGACACGGAAACATGAGTTTCGAAGGTGTTCCGTTTGTGGTGCGGTGAATTATTGTTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTTCGACATAAGGCGGAGTGTGCTCCGGTGGAACGGTGGCTTGATGAGGATGGTGAAGACGACGGTGAAGATGACGGCGACCGTGAGGTAATGGTTATGGAAGATAGTTAG 1146 0.4599 MRTRRGSYYPESGIVTKMCSFGNKRKPKETISYAKRQKKCSEKPTTTTTDYDFFESLPDDIVISIFCRLSSTATSPSDFVTVLLTCKRLKSLALHSLVLSKASPRTFSIRAKNWSDSAQKFLKNCAEAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNISEGRRFLIQANARELAAVLSTNAAARQLVNSNLQSQLRYVAATGCPLLSDFGCNVPAPEPHPASRFLTEWFTVRSDSLDSGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLDEDGEDDGEDDGDREVMVMEDS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1306 381 PANTHER MYND DOMAIN-CONTAINING 32 379 IPR044508 -
Tpr3g1306 381 SUPERFAMILY HCP-like 113 235 - -
Tpr3g1306 381 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 32 379 - -
Tpr3g1306 381 Pfam MYND finger 312 352 IPR002893 -
Tpr3g1306 381 Gene3D - 300 356 - -
Tpr3g1306 381 SUPERFAMILY F-box domain 43 109 IPR036047 GO:0005515
Tpr3g1306 381 MobiDBLite consensus disorder prediction 360 381 - -
Tpr3g1306 381 SUPERFAMILY HIT/MYND zinc finger-like 307 357 - -
Tpr3g1306 381 Gene3D Tetratricopeptide repeat domain 97 260 IPR011990 GO:0005515
Tpr3g1306 381 ProSiteProfiles Zinc finger MYND-type profile. 310 352 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1306 Tpr-Chr3 11551044 11552992 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1306 - - gmx:100798174 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1306 3 11551044 11552992 Tpr3g1306 3 11551044 11552992 ECH
Tpr2g4663 2 51954417 51956038 Tpr3g1306 3 11551044 11552992 PCT