Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4663 ATGCGAACCAGAAGAGGCTTTTGTTATCCTCAAACACAACCACTTTCAAACATGTGTTCTGAGTTCACCAATACCCACAAAAGACAGAAAATAATGCTGTCGGAAAAACCCACCGGAGAAGAAGATTCTGATTTCTTTGATTCTTTACCTGATGACCTTGTCCTCTCTGTTCTCACAAAACTTATTTCCACTGCAACTTCTCCCTCTGATTTTATCAGTGTTCTAATCACGTGCAAAAGACTAAATGGTTTAAGTCTAAACTCTTCTGTTTTGTCAAAAGCATCGAACAAAACATTATCGGTTAAAGCTAAAAACTGGTCTGACTCTGCTCAACGCTTCCTCAAACGCTGTGCTGATGCCGGAAACATCGAAGCTTGTTACACTCTCGGAATGATTCGGTTTTATTGTTTGCAAAACAGAGGAAGTGGCGCGTCGTTGATGGCAAAAGCAGCGATGAAATCTCACGCGCCGTCTTTGTATTCATTAGCCGTAATTCAGTTCAATGGAAGCGGTGGAACGAAAAACGACAAAGATTTACGCGCCGGTGTTGCTCTGTGTGCACGCGCTGCATTTCTCGGCCATATCGACGGTTTACGTGAGTTGGGTCATTGTTTACAAGACGGTTACGGCGTTAAACAGAACGTTATAGAGGGACGGCGGTTTTTAGTTCAAGCTAACGCCCGTGAACTCGCTGCCGTTTTGTCCAACGGCAATACCAAACAGCCGTTGCTGACGTGGAGTATTAACCCGTTTCCGAATCAGCCACCACTGCTTCGGGTTACTACCGGGTCGGGTTGTCCGTTGCTAAGTGATTTTGGTTGTAATATTCCGGTTCAAGAGGCTCACCCGGCTAACCAATTTATGTCTGAATGGTTTTCTATTCGGGGCGGGTTTCCGGGTCAAGGTATGAGATTATGTTCTAATACCGGTTGTGGAAGACCGGAGACAAGGAAGCACGAGTTTAGAAGGTGTTCGGTTTGCGGCGCGGTGAATTATTGCTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTCCGACACAAGGCGGAATGTGCCCCGGTTGAGAGGTGGCTTGATGAGGAGGGGGAACATGTTCCCGGTGAAAATGACGGCGGCGTTAACGTTGATGAGGTGGTTGTGCTTGATAGGTAG 1149 0.4665 MRTRRGFCYPQTQPLSNMCSEFTNTHKRQKIMLSEKPTGEEDSDFFDSLPDDLVLSVLTKLISTATSPSDFISVLITCKRLNGLSLNSSVLSKASNKTLSVKAKNWSDSAQRFLKRCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMKSHAPSLYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDGLRELGHCLQDGYGVKQNVIEGRRFLVQANARELAAVLSNGNTKQPLLTWSINPFPNQPPLLRVTTGSGCPLLSDFGCNIPVQEAHPANQFMSEWFSIRGGFPGQGMRLCSNTGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLDEEGEHVPGENDGGVNVDEVVVLDR* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4663 382 Gene3D Tetratricopeptide repeat domain 87 241 IPR011990 GO:0005515
Tpr2g4663 382 ProSiteProfiles Zinc finger MYND-type profile. 308 350 IPR002893 -
Tpr2g4663 382 Gene3D - 298 354 - -
Tpr2g4663 382 SUPERFAMILY F-box domain 34 92 IPR036047 GO:0005515
Tpr2g4663 382 Pfam MYND finger 311 350 IPR002893 -
Tpr2g4663 382 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 23 381 - -
Tpr2g4663 382 PANTHER MYND DOMAIN-CONTAINING 23 381 IPR044508 -
Tpr2g4663 382 SUPERFAMILY HCP-like 108 225 - -
Tpr2g4663 382 SUPERFAMILY HIT/MYND zinc finger-like 305 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4663 Tpr-Chr2 51954417 51956038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4663 - - gmx:100798136 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4663 2 51954417 51956038 Tpr2g4663 2 51954417 51956038 ECH
Tpr2g4663 2 51954417 51956038 Tpr3g1306 3 11551044 11552992 PCT