Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1289 ATGGAAGAGGAAAAGGGTATTGAGATTGTGGCATTGGAATCTTTGGGTAAAGGGTTTGATTTAGCTAGTGATTTTCGTTTGAGATTTGCTAAGGGAATTCGTGATGGTGTTAATAGTAGGAAAAGGTTGGTGGTTCTTGATGAAGAAAACAAGAGGGATATTTTGATTCCTGGAGCTGCTGGAGCTACTGTAATCAAAGGGGTTTCTGAGAATATTCGGTGTGATAAAGGAGATCGAATTCGGTTCAAGTCTGATGTACTTGAATTCAATCAGATGTCTGAGTTGCTAAATCAAAAATCAGCAGTACGAGGAAAAATTCCTTCTGGCTATTTTAACGCTCTTTTTGATATGAGTGGTGATTGGCTTCGTGATGCTGCTGACATAAAAAACCTTGCTTTTGATGGGTATTTCATCTCTCTCTACTGTTTGCACTTGACTGCTTCCCCACTTGTACTACAAGAGGAAGTAAAGAAATCAGTTCCAGCTCAGTGGGATCCAGCTTCATTGTCTAGGTTCATCCAGACGTATGGTACTCACATAGTAGTAGGCATGGCTGTTGGAGGTCAAGATGTAATCTGTGTCAAACAAAAACATTCATCTAAGATTCCTCCCGGTGATATCAGGAGACATTTAGAGGATCTTGGAGATTTTTTGTTTTCGGATGTAAGAAGCCCTTCTTCACTACAGAGGAAGCCGGCAGATAGCAAACAGAAGGTCCCCGAGGTCTTTAATCGTGTGATGCAATCAAACACAACACAGTTTACCAGTATTTCAGAAACTTCTAGCAAGGACGGCCTCACTATTATTTGCTCCAAACGAGGAGGAGATGTGTACAAGCACAGTCACTCACATTGGCTCCAGACAGTGGCTGCTAATCCTGAAGCGATCATATTCAAGTTTGTTCCTATTTCCTCACTTCTGACTGGAATTCCTGGAAGTGGCTATCTTAGTCATGCAATCAATTTATATTTACGATATAAGCCTTCTCCCGAAGATTTACAATATTTTTTAGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTGCGAACTGCCTCTCAGGCATCAGCGGAGAAAGACCTCTTCCCTTTTACTGCAATTCAGTTGCTTCAGTCCAAAGCTTCATATTAGCTCTACACAGGTGGAAAGTGAACAGAAACCTGTGGTTGGCCTCCGATTGTACCTGGAGGGTAAGAAAAGTGACAGACTTGCTTTACATATAAATCATCTTTCGAGCCTCCCAAACAAGATGACCCTCTCTTCAAGTACCTCAACACCAACCCCGAGCATACCATCTATGTGGCGTGGATCCGATGAAAATGAATCCAGTGACCAATTCCTAGAACCAGTCAGATGGAAGAGATTCTCAAATGTGTGCACAGCTGTGGTCAAACATGACCCTAACTGGTTGAATGATTGCGGAGGTGTTTATATTGTAACCGGTGCACAAATCATTATCAAAGGAAGTTGGCCGAGAAACGTGCTTCATCTGCGTCTTCTTTTTACTCATATAGCCAATTGCACTATACGGAAGTCGGAGTGGGGCGCTGCACCAGAGACTTCAAGAAAATCATCTTTCCTCACAAATTTGAGCACAACATTTTCATTCACACAGCAGAGTACTACTGCTGCCCCACCAAAGCAGGCTCCGACTGCACTTAACTCTGGCATTTATCCAAACGGTCCACCCGTGCCTGTTCGCTCGAGTAAGCTACTTAAATATGTTGAGACAGCTGAGGTTCTACGAGGCCCTCATGATGCTCCTGGACATTGGTTAGTTACAGCTGCTAAGCTTGTGACCGAGGGTAGTAAGATAGGATTGCAGGTAAAGTTTGCATTGTTGGATTATTGGTGA 1857 0.4297 MEEEKGIEIVALESLGKGFDLASDFRLRFAKGIRDGVNSRKRLVVLDEENKRDILIPGAAGATVIKGVSENIRCDKGDRIRFKSDVLEFNQMSELLNQKSAVRGKIPSGYFNALFDMSGDWLRDAADIKNLAFDGYFISLYCLHLTASPLVLQEEVKKSVPAQWDPASLSRFIQTYGTHIVVGMAVGGQDVICVKQKHSSKIPPGDIRRHLEDLGDFLFSDVRSPSSLQRKPADSKQKVPEVFNRVMQSNTTQFTSISETSSKDGLTIICSKRGGDVYKHSHSHWLQTVAANPEAIIFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSPEDLQYFLEFQIPRQWAPMFCELPLRHQRRKTSSLLLQFSCFSPKLHISSTQVESEQKPVVGLRLYLEGKKSDRLALHINHLSSLPNKMTLSSSTSTPTPSIPSMWRGSDENESSDQFLEPVRWKRFSNVCTAVVKHDPNWLNDCGGVYIVTGAQIIIKGSWPRNVLHLRLLFTHIANCTIRKSEWGAAPETSRKSSFLTNLSTTFSFTQQSTTAAPPKQAPTALNSGIYPNGPPVPVRSSKLLKYVETAEVLRGPHDAPGHWLVTAAKLVTEGSKIGLQVKFALLDYW* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1289 618 PANTHER OS02G0475300 PROTEIN 2 617 - -
Tpr3g1289 618 SMART MACPF_8 128 325 IPR020864 -
Tpr3g1289 618 Pfam MAC/Perforin domain 111 323 IPR020864 -
Tpr3g1289 618 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 337 IPR020864 -
Tpr3g1289 618 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 2 617 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1289 Tpr-Chr3 11403201 11408582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1289 - - gmx:100781070 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4644 2 51704867 51708711 Tpr3g1289 3 11403201 11408582 PCT