Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4644 ATGGAAGAAGGTAATAGTTTGAAGATGATGTTTCCTATGGAGAAGAGAGCATTGGATTGTCTTGGTAAAGGTTTTGATCTAACAAGTGATTTTAGAATGAAATTTTCAAAGGGATTAATTAATGGTGGAAGGTTAGTGGTGATTGATGAAATGAACAAAAGGGATATTATGGTTCCTGGTGGAGTTGTTATTCAAGATGTTTCAGAAGATATTCGATGTGATAAAGGTGATCGTGTTCGGTTCAAATCTGATGTTCTTCAATTCAATCAGATGTCTGAAATGCTTAATCAGAAATCAGCTATACAAGGAAAAATTCCTTCTGGTTATTTTAATGCTGTGTTTGATTTAAGTGGTGATTGGTTCCGCGACGCTCAAGACATCAAATCTCTTGCATTTGATGGTTACTTCATTTCTCTTTACTATTTGCACTTAACTGCTTCACACCTTAAACTGCAAGAAGAAGTTAAGAAATCTGTTCCAGCGCAGTGGGATCCAGCTTCATTGTCCAGGTTTATTGCGACATATGGTACACACATAATAGTAGGTATGGCTGTTGGAGGTCAAGATGTAATTTGTGTCAAACAAAAACATTCTTCGAAGGTTCCTCCTGGTGATCTCAGAAGACATTTAGAGGATTTAGGAGATTTTTTGTTTTCAGATTTAAGAAGCCCTTCTCTACTAGAGAGGAAGTCCACAACAGAAGCAAAACAAAAAGTCCCGGAGGTTTTTAATCGTGTGATGCAATCAAGCACAATGCAGTTCACAAGTATTTCAGAAACGTCGAGCAAAGATGGCCTCACTATCATTTGTTCGAAAAGAGGAGGAGATGTTTTTAAGCACAGTCACTCAAGTTGGCTTCAAACAATGACTTCTAATCCTGAAGCAATCCACTTCAAATTTGTTCCTATTTCATCACTTCTCACAGGAATTCCTGGAAGTGGCTATCTTAGTCATGCAATCAATTTGTATTTAAGATATAAGCCCTCTCCAGAAGACTTACAATACTTCTTGGAGTTTCAAATTCCTCGAGAATGGGCACCCATGTTTTCTGATCTGCCTTTGAGGCATCAAAGGAAAAAGACTTATTCTCCTCCACTGCAATTTAGTTTCATGTCTCCAAAGCTTCATATCAACTCTACACAGGTAGTAAGTGAACAAAAACCTGTGGTTGGTCTCCGATTATACTTGGAGGGAAGGAAATGTGATAAACTTGCAATACATATACATCATCTTTCAAGCCTCCCAAATACAATGATCCTTTCTTCAACCGCTACAACAATGTCGCGAGGATCCGACGATGACGAATCAAGTGACCAATTCGCGGAACCAATAAGATGGAAGAGATTCGCGCACGTGTGCACTTCAGTTGTTAAGTATGACCCTAACTGGTTACATGAATCAAATTCAACCGGTGTTTATATCGTAACCGGTGCTCAACTCATTAGCAAAGGGAATTGGCCAAGGAACATGCTTCATTTACGCCTTCTCTTCACTCACATACCAAATTGCAGCATCAGGAAAACAGAATGGGATGCTGCACCAGAGACTTCAAAAAAATCATCATTCTTCACAAATCTAAGCACAACATTTTCATTCACACAACAAAGTGTTACTGCTAAACAGAAACAGGCACAACAGGCTGCTGCAACTGCACTAAACTCTGGTGTTTATCCGAATGGTCCGCCTGTGCCTGTTCGTTCTGCTAAAATGCTTAAATATGTGGAGACAAGTGAGGTTGTCCGGGGACCTCACGATGCTCCTGGGCATTGGTTGGTAATTGCTGCTAAGCTTGTGACAGAGGGTGGTAAAATCGGATTACAGGTCAAGTTTGCATTGTTAGATTACGAGTGA 1851 0.3971 MEEGNSLKMMFPMEKRALDCLGKGFDLTSDFRMKFSKGLINGGRLVVIDEMNKRDIMVPGGVVIQDVSEDIRCDKGDRVRFKSDVLQFNQMSEMLNQKSAIQGKIPSGYFNAVFDLSGDWFRDAQDIKSLAFDGYFISLYYLHLTASHLKLQEEVKKSVPAQWDPASLSRFIATYGTHIIVGMAVGGQDVICVKQKHSSKVPPGDLRRHLEDLGDFLFSDLRSPSLLERKSTTEAKQKVPEVFNRVMQSSTMQFTSISETSSKDGLTIICSKRGGDVFKHSHSSWLQTMTSNPEAIHFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSPEDLQYFLEFQIPREWAPMFSDLPLRHQRKKTYSPPLQFSFMSPKLHINSTQVVSEQKPVVGLRLYLEGRKCDKLAIHIHHLSSLPNTMILSSTATTMSRGSDDDESSDQFAEPIRWKRFAHVCTSVVKYDPNWLHESNSTGVYIVTGAQLISKGNWPRNMLHLRLLFTHIPNCSIRKTEWDAAPETSKKSSFFTNLSTTFSFTQQSVTAKQKQAQQAAATALNSGVYPNGPPVPVRSAKMLKYVETSEVVRGPHDAPGHWLVIAAKLVTEGGKIGLQVKFALLDYE* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4644 616 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 4 337 IPR020864 -
Tpr2g4644 616 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 11 615 IPR044663 GO:0006952|GO:0012501|GO:2000031
Tpr2g4644 616 Pfam MAC/Perforin domain 110 323 IPR020864 -
Tpr2g4644 616 SMART MACPF_8 127 325 IPR020864 -
Tpr2g4644 616 PANTHER OS02G0475300 PROTEIN 11 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4644 Tpr-Chr2 51704867 51708711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4644 - - gmx:100787945 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4644 2 51704867 51708711 Tpr3g1289 3 11403201 11408582 PCT