Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1026 ATGGCATCATCAACAGTAATTGCAATGACCATGATCAACACAAAGTGCTTAAACAACACTTCAAATTCACCAAAACTTCCCTACCCAACAAAACTCATTACAAAACCAACTTCACTCCTTTCCCTTAGAAACCTTTTTCCAAAGAAATTTTCCACCACAACAAAAAACACAAAACTATCAACTTCCATAGCAGGAACAGCACTAGCAGGAGCAATATTCTCAACACTTGGAACATGTAACCCTGCTTTTGCAGCACAACAAATAGCTGAAATAGCAGAAGCAACATCAGATAACCGCGGTTTAGCACTTTTGTTACCATTAATTCCAGCTATAGCTTGGGTTCTTTATAACATTCTTCAACCAGCACTTAACCAAATCAACCGAATGCGTAACGATAAAGGGGTTATCATTGGTTTGGGTCTTGGTGGATTAACAGCTTCTTCAGGGTTTTTGTCACCACAAGATGCAATGGCTAGTGAAATTGCTGCAATTGCTGAAGCTGGTAGTAGTGATAATAGGGGTCAGCTTCTGTTGTTTGTGGTAGCACCAGCTATTCTTTGGGTTCTTTACAATATTTTGCAGCCTGCTCTTAATCAAATCAACAGAATGAGATCAGATTGA 621 0.3913 MASSTVIAMTMINTKCLNNTSNSPKLPYPTKLITKPTSLLSLRNLFPKKFSTTTKNTKLSTSIAGTALAGAIFSTLGTCNPAFAAQQIAEIAEATSDNRGLALLLPLIPAIAWVLYNILQPALNQINRMRNDKGVIIGLGLGGLTASSGFLSPQDAMASEIAAIAEAGSSDNRGQLLLFVVAPAILWVLYNILQPALNQINRMRSD* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1026 206 Hamap Photosystem II protein Y [psbY]. 97 131 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Tpr3g1026 206 Pfam Photosystem II protein Y (PsbY) 171 203 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Tpr3g1026 206 Pfam Photosystem II protein Y (PsbY) 97 129 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Tpr3g1026 206 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 205 IPR038760 GO:0009523
Tpr3g1026 206 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1026 Tpr-Chr3 9342245 9343313 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1026 K02723 - zju:107428525 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1026 3 9342245 9343313 Tpr3g1026 3 9342245 9343313 ECH
Tpr3g1026 3 9342245 9343313 Tpr2g4732 2 52697674 52698520 PCT