Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4732 ATGGCAGCAACAATGGCAATGATGATTAACTCAAAGTGCCTAAACACAAGCCTACCCAAGTTACAAAATCCCACAACTAAGCTAACAACAACAACATGCAAAATCACTGCCACTCAGAACCAACCAAAGGGTCTTATCTCAATTGAGAACACAAAATTTGTGTCACCTTCATTTGCAATTGCAGGAGCAATATTTTCATCACTTGCAACCTCCGACGCGGCTTTTGCTGCTCAACAAATAGCAGAAATAGCTGAAGGTGATAACAGAGGAATAGCACTTTTGTTGCCATTGATTCCAGCTATAGCTTGGGTTTTGTTCAATATTTTGCAGCCAGCTTTGAACCAAATCAACCGTATGCGTAGCACAAGAGGAGTTATTGTTGGGCTTGGTCTTGGGCTTGGTGGGCTTGCAGCTTCAGGTATGGTGTCAGAAGCATCGGCTAGCGAGATTGGTTCGATTGCTGAAGCTGCTGCTGCAGCAGGAAGTGACAACAGGGGTACACTTCTGTTGTTTGTGGTTGCTCCAGCTATACTTTGGGTGCTTTACAATATTTTGCAGCCTGCTCTCAACCAGATCAATAGGATGAGAAACTAG 594 0.4394 MAATMAMMINSKCLNTSLPKLQNPTTKLTTTTCKITATQNQPKGLISIENTKFVSPSFAIAGAIFSSLATSDAAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRSTRGVIVGLGLGLGGLAASGMVSEASASEIGSIAEAAAAAGSDNRGTLLLFVVAPAILWVLYNILQPALNQINRMRN* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4732 197 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 197 IPR038760 GO:0009523
Tpr2g4732 197 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 197 - -
Tpr2g4732 197 Hamap Photosystem II protein Y [psbY]. 87 121 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Tpr2g4732 197 Pfam Photosystem II protein Y (PsbY) 163 195 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Tpr2g4732 197 Pfam Photosystem II protein Y (PsbY) 87 119 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4732 Tpr-Chr2 52697674 52698520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4732 K02723 - cpap:110809428 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1026 3 9342245 9343313 Tpr2g4732 2 52697674 52698520 PCT