Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0927 ATGGGAGTTGGAGGCACTTTGGAGTACTTGTCTGATCTAGTGAGCAGTGGTCACCACCACCTCAAGAAGAAGAAGAAACAGTACCAAACTGTAGAGCTAAAGGTTAGGATGGACTGTGATGGCTGTGAACTTAAGGTCAAGAAAGCCCTTTCTTCACTAAGTGGGGTAAAATCAGTAGAGATAAACCGTAAACAGCAAAAAGTGACTGTAACTGGGTTTGTGGAGCCAAACAAGGTGCTGAAGAAGGCTAAGTCAACTGGGAAGAGGGCTGAAATTTGGCCTTATGTGCCTTACAACTTGGTGGCTCAACCTTATGCTGTTTCTACTTATGACAAGAAGGCTCCTCCTGGTTATGTTAGGAGAGTGGAGAATGCTCCAACCACTGGAACAACCATGACAAGATATGAAGATCCTTATGTCAACATGTTCAGTGATGAAAACCCAAATGCATGTTCTATCATGTAG 465 0.4366 MGVGGTLEYLSDLVSSGHHHLKKKKKQYQTVELKVRMDCDGCELKVKKALSSLSGVKSVEINRKQQKVTVTGFVEPNKVLKKAKSTGKRAEIWPYVPYNLVAQPYAVSTYDKKAPPGYVRRVENAPTTGTTMTRYEDPYVNMFSDENPNACSIM* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0927 154 Pfam Heavy-metal-associated domain 34 88 IPR006121 GO:0046872
Tpr3g0927 154 SUPERFAMILY HMA, heavy metal-associated domain 28 94 IPR036163 GO:0046872
Tpr3g0927 154 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 154 IPR045181 GO:0046872
Tpr3g0927 154 CDD HMA 32 91 IPR006121 GO:0046872
Tpr3g0927 154 Gene3D - 17 94 - -
Tpr3g0927 154 ProSiteProfiles Heavy-metal-associated domain profile. 37 92 IPR006121 GO:0046872
Tpr3g0927 154 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0927 Tpr-Chr3 8589131 8590310 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0927 - - gmx:100500473 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0927 3 8589131 8590310 Tpr3g0927 3 8589131 8590310 ECH
Tpr3g0927 3 8589131 8590310 Tpr2g4955 2 55316677 55317570 ECH
Tpr3g0927 3 8589131 8590310 Tpr2g4955 2 55316677 55317570 PCT