Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4955 ATGGGAGTTGGAGGAACTCTAGAGTACTTATCTGATCTAATGGGTAGTGACCACCACCACCAACACAAGATCAAGAAGAAGAAGAAGCAATTGCAGACTGTAGAATTGAAGGTGAGGATGGATTGTGATGGTTGTGAGCTTAAAGTCAAGAAAGCCCTTTCTTCAATAAATGGAGTGAAATCAGTGGAGATAAACAGGAAACAGCAAAAAGTGACAGTAATGGGGTATGTGGAGGCAAATAAGGTGCTAAAGAAGGCTAAGTCAACAGGGAAGAAAGCAGAGATTTGGCCTTATGTGCCATACAACATGGTGGCTCATCCTTATGCTGCTCCTTCTTATGACAAGAAGGCTCCTCCTGGATATGTGAGGAGATTGGAGACTACTGGAATTGTTACGACATATGAAGAGCCGCGCATCACCACCATGTTCAGTGATGAAAATCCAAATGCCTGTTCCATTATGTAG 465 0.4301 MGVGGTLEYLSDLMGSDHHHQHKIKKKKKQLQTVELKVRMDCDGCELKVKKALSSINGVKSVEINRKQQKVTVMGYVEANKVLKKAKSTGKKAEIWPYVPYNMVAHPYAAPSYDKKAPPGYVRRLETTGIVTTYEEPRITTMFSDENPNACSIM* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4955 154 Gene3D - 18 97 - -
Tpr2g4955 154 Pfam Heavy-metal-associated domain 37 92 IPR006121 GO:0046872
Tpr2g4955 154 SUPERFAMILY HMA, heavy metal-associated domain 31 97 IPR036163 GO:0046872
Tpr2g4955 154 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 154 IPR045181 GO:0046872
Tpr2g4955 154 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 154 - -
Tpr2g4955 154 ProSiteProfiles Heavy-metal-associated domain profile. 40 95 IPR006121 GO:0046872
Tpr2g4955 154 CDD HMA 35 94 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4955 Tpr-Chr2 55316677 55317570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4955 - - gmx:100776974 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4955 2 55316677 55317570 Tpr2g4955 2 55316677 55317570 ECH
Tpr3g0927 3 8589131 8590310 Tpr2g4955 2 55316677 55317570 ECH
Tpr3g0927 3 8589131 8590310 Tpr2g4955 2 55316677 55317570 PCT