Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0787 ATGAAGATAGGTAAGGTGAGATTGGTGATATTGGTGATTACAATGATGATGTTGAACTTGTCTTCTTGTTCAGCTTGGTTTGGTAATAAACGCAAAAGTGGAGGAAACTATATTCTACCAGATGAAGCTATGTCTTCAAGACCAAGTCTCATGAACCATGCTGCTGGTTCTTCAATTGTTTTCCCTATTTATGGCAACGTTTATCCTGTTGGGTTCTATAATGTTACTCTCAACATAGGCCAACCACCAAGGCCTTATTATCTTGATGTTGACACTGGTAGTGAACTCACATGGCTTCAATGTGATGCCCCTTGTTCTCAATGTTCTGAGACACCACATCCACTCTACAAGCCTAGCAATGACTTTGTGCCCTGCAAGGATCCAATATGTGCATCCTTGCAGCCTACTGATGACTACACATGTGAAGACCCTAATCAATGTGACTACGAAATTAAGTATGCTGATCAATACTCGACTCTTGGTGTACTTATAAATGATGTCTACCTTCTCAACTTCACCAATGGAGTCCAACTTAAAGTTCGGATGGCGCTCGGATGTGGATATGATCAGATTTTTTCACCTTCTACTTACCATCCCTTAGATGGAATACTTGGACTTGGAAGGGGAAAAGCTAGCTTGGTATCACAGCTGAATAGTCAGGGACTGGTGCGAAATGTGATCGGACATTGTTTAAGCTCGCGAGGAGGAGGATATATCTTCTTCGGAAATGTTTATGATTCTTCTAAAATGAGTTGGACACCAATTTCATCTATAGATTCAGGAAAACATTACTCGGCAGGACCAGCTGAACTTGTTTTCGGAGGAAGGAAGACTGGTGTGGGAAGTCTGAATATTATTTTTGATACTGGAAGTTCCTATACTTATTTCAACTCTCAGGCTTACCAAGCATTGATTACTTTGCTGAGTAAGGAATTAAATAGAAAGCCAATAAAAGCTGCACCTGATGACCAGACTTTACCGATGTGTTGGCACGGTAAAAGACCTTTCAGAAGCTTAAATGAAGTGAAGAAATACTTCAAGCCACTAACACTTAGTTTCACCAATGGTGGAAGAGTTAAACCTCAGTTTGAGATTCCTCCTGAAGCTTATCTTATAATATCAAACAAGGGAAATGTTTGTCTGGGCATTCTAAATGGCCCTGAAGTAGGGTTGGGTGAACTGAACCTTATTGGAGACATATCCATGCTAGACAAAGTGATGGTATTCGACAACGAAAAACAGTTGATTGGATGGGGACCAGCAGATTGCAATGGTGTTCCAAAATCCAGAGATGCCAGTTTATGA 1305 0.4069 MKIGKVRLVILVITMMMLNLSSCSAWFGNKRKSGGNYILPDEAMSSRPSLMNHAAGSSIVFPIYGNVYPVGFYNVTLNIGQPPRPYYLDVDTGSELTWLQCDAPCSQCSETPHPLYKPSNDFVPCKDPICASLQPTDDYTCEDPNQCDYEIKYADQYSTLGVLINDVYLLNFTNGVQLKVRMALGCGYDQIFSPSTYHPLDGILGLGRGKASLVSQLNSQGLVRNVIGHCLSSRGGGYIFFGNVYDSSKMSWTPISSIDSGKHYSAGPAELVFGGRKTGVGSLNIIFDTGSSYTYFNSQAYQALITLLSKELNRKPIKAAPDDQTLPMCWHGKRPFRSLNEVKKYFKPLTLSFTNGGRVKPQFEIPPEAYLIISNKGNVCLGILNGPEVGLGELNLIGDISMLDKVMVFDNEKQLIGWGPADCNGVPKSRDASL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0787 434 Gene3D Acid Proteases 242 426 IPR021109 -
Tpr3g0787 434 Pfam Xylanase inhibitor C-terminal 281 418 IPR032799 -
Tpr3g0787 434 Pfam Xylanase inhibitor N-terminal 73 243 IPR032861 -
Tpr3g0787 434 Gene3D Acid Proteases 49 241 IPR021109 -
Tpr3g0787 434 PRINTS Pepsin (A1) aspartic protease family signature 79 99 IPR001461 GO:0004190|GO:0006508
Tpr3g0787 434 PRINTS Pepsin (A1) aspartic protease family signature 285 296 IPR001461 GO:0004190|GO:0006508
Tpr3g0787 434 PRINTS Pepsin (A1) aspartic protease family signature 395 410 IPR001461 GO:0004190|GO:0006508
Tpr3g0787 434 ProSiteProfiles Peptidase family A1 domain profile. 73 419 IPR033121 -
Tpr3g0787 434 PANTHER ASPARTYL PROTEASES 2 428 IPR001461 GO:0004190|GO:0006508
Tpr3g0787 434 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 428 - -
Tpr3g0787 434 SUPERFAMILY Acid proteases 65 423 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0787 Tpr-Chr3 7484594 7488032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0787 57 429 Miscellaneous Gene Families AT1G44130 53.316 1.54e-145 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0787 - - gmx:100783051 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0787 3 7484594 7488032 Tpr3g0787 3 7484594 7488032 ECH
Tpr3g0787 3 7484594 7488032 Tpr3g3203 3 35201206 35204674 ECH