Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0758 ATGGCAGCTGAGCTAGTCAATGCTGCAACAAGTGAGAAACTGTCTGAAATTGATTGGATGAAAAATATTGAAATCTCTGAATTAGTTGCTCATGATCAAAGGAAAGCTAAAGATGTTGTTAAAGCTATAAAAAAGAGACTTGGTAACAAGAACCCCAATGCTCAACTCTATGCTGTCATGTTGCTGGAAATGTTGATGAACAACATAGGAGATCCTATTCATCAGCAGGTGGTTGATGCAGAAATTATTCCTATTTTTGTGAAAATTGTAAAGAAAAAGTCAGATTTGCCTGTCAGGGAGCGAATATTTCTCCTACTAGATGCAACACAAACCTCTCTTGGCGGTGCTTCAGGAAAGTTTCCGCAGTATTACAAGGCATATTATGATTTGGTGAGTGCTGGGGTGCAATTTCCTCAAAGAGCTCCAATTGTCCAATCAAATCGTCCTAGTTCACAATCAAATAGGACTGATAATGTACCAAAAAGGGCGCAAGTCCCACTTAGACATGAAGGGGTTCCTCAAAAGGCAGAATCCAACACTGTGCCTGAATCTAGCATTATCCAAAAGGCCAGTAATGTGTTGGAAATTCTAAAGGAAGTCCTTGATGCTGTTGATGCCAAACATCCTCAGGGAGCAAGCGATGAATTCACCCTTGACCTTGTTGAGCAATGTTCATTTCAAAAGCAGAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGGACAGTTTCCCGAGCAATCGAATTGAATGAGCAGCTTCAGAAAGTTCTAGAGAGACATGATGACCTTCTTTCTAGCAAAGTTACAACAACTGTGAATCACTTTGACCGTGAAGAAGCAGAGGAGGAAGAAGAACCCGAACAGTTATTCAGAAGATTACGCAAAGGAAAAGCTTGTGTGAGGCCTGAAGATGAAGAAACTGAACCTCGGTTCCCTCAATTGAGTTTGCTTGAAGAGAGACTCAACCGTCCACTAATAAGACCTTTGGAACCATCTCAAGAAGCTAATGCTCGTCATGTACCTGTTGTAGTTTCTCCTCCAAGTTCAAAACATGATGAAGAGCTTCCTCCTGTTGCAATTCCACCGCCACCTTCAAAGCACATCGAGAGAGAAAGATATTTTCAGCATAGTAAGGACAGTGGCACTTTGGATGGCCACATCAGAGGCCTTTCTTTACATAGTCGCAATGGCAGCAGCTCGCAGAGTGGAAGCTTTGATTTTAGCGAGTGA 1233 0.4217 MAAELVNAATSEKLSEIDWMKNIEISELVAHDQRKAKDVVKAIKKRLGNKNPNAQLYAVMLLEMLMNNIGDPIHQQVVDAEIIPIFVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYKAYYDLVSAGVQFPQRAPIVQSNRPSSQSNRTDNVPKRAQVPLRHEGVPQKAESNTVPESSIIQKASNVLEILKEVLDAVDAKHPQGASDEFTLDLVEQCSFQKQRVMHLVMASRDERTVSRAIELNEQLQKVLERHDDLLSSKVTTTVNHFDREEAEEEEEPEQLFRRLRKGKACVRPEDEETEPRFPQLSLLEERLNRPLIRPLEPSQEANARHVPVVVSPPSSKHDEELPPVAIPPPPSKHIERERYFQHSKDSGTLDGHIRGLSLHSRNGSSSQSGSFDFSE* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0758 410 Pfam GAT domain 193 266 IPR004152 GO:0035091|GO:0043130
Tpr3g0758 410 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Tpr3g0758 410 MobiDBLite consensus disorder prediction 144 160 - -
Tpr3g0758 410 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Tpr3g0758 410 MobiDBLite consensus disorder prediction 144 163 - -
Tpr3g0758 410 SUPERFAMILY GAT-like domain 184 267 - -
Tpr3g0758 410 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Tpr3g0758 410 Coils Coil 187 207 - -
Tpr3g0758 410 Gene3D - 2 136 IPR008942 -
Tpr3g0758 410 CDD VHS 2 130 - -
Tpr3g0758 410 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Tpr3g0758 410 Pfam VHS domain 5 112 IPR002014 GO:0035091|GO:0043130
Tpr3g0758 410 MobiDBLite consensus disorder prediction 366 384 - -
Tpr3g0758 410 PANTHER TOM1-LIKE PROTEIN 1 409 IPR044836 GO:0035091|GO:0043130|GO:0043328
Tpr3g0758 410 MobiDBLite consensus disorder prediction 346 410 - -
Tpr3g0758 410 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 409 - -
Tpr3g0758 410 Gene3D - 180 274 IPR038425 -
Tpr3g0758 410 MobiDBLite consensus disorder prediction 393 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0758 Tpr-Chr3 7246099 7251635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0758 - - gmx:100802949 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0758 3 7246099 7251635 Tpr3g0758 3 7246099 7251635 ECH
Tpr3g0758 3 7246099 7251635 Tpr3g3223 3 35403887 35409920 PCT