Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0755 ATGTCTCACGATGAGTCCTCACCAAACCAAACAACACCACAAGACTCACTACTTGTTGAAACTGATGTAAATGTTCCACAGCCTGAAAAAACAGCTATCATTCCCTTAGAGTCAGAGCAAGAAGATTCACACCCTGAACCTCAGGAGAAGAACAAAAACAACAACAACCCTGTTGTTGAAACTGTCACTCTTCAGACTCATTTCTCCAAACCCGATACCGATTCTGCTGATACCTTCAAAGAAGAACAAACTACCAAAACTTCTGAATCTGATCTTTCTCAAAATGAAAACAAGCCACTCCAAGAGCTTAAGAATCTCATTCAACAAGCACTCAATAACCATGAATTCTCTTCTCCTTCGCCCATAAAAGAAGAAAAACCATCCACCACCACCGTTGCTGCTGCACCTGAAAATGCTACCCCTGCAGAAGAACCTGCACAACCAAAGGTGGAGGAGGAAGTTGAAACCAAGAAAGAGGAAGAAAAAGAACAGCAAGAAGAAGAAGTGAAGGAAACTGTGCAGGTAGCTTCTGTGGATGATGATGATGGAGCAAAAACTGTGGAAGCTATTGAAGAAAGCGTCGTTAACATTGCGGTTTCTTCCTCTGTTCCTGCTGAGCATGAACAATCTGTTGCAGAGAAAGTTGAAGCTTCATTGCCATTAGCACCCGAAGAAGTAACCATTTATGGCATACCACTCCTTGCAGATGAAAGAACTGACGTGATTCTTACGAAATTTCTTCGTGCAAGAGATTTTAAGGCGAAAGAGGCTTTCACAATGATCAAGAACACAATTCTCTGGAGAAAAGAATTTGGAATAGAGGAGTTGATGGATGAGAAATTTGGTGATGAATTGGAGAAAGTTGTTTACATGCATGGATTTGATAAGGAAGGTCACCCTGTGTGTTATAACATATATGGTGAATTTCAGAATAAGGAATTGTATAAGAAGTGTTTTTCTGACGAGGAGAAGAGACAGAATTTCCTTAGATGGAGAATTCAGTTCCTTGAGAAGAGTATTAGGAATTTGGATTTTAACAATGCTGGTATTTGCACTATTGTTCAGGTGAATGATCTTAAGGATTCTCCTGGACCTGCTAAATGGGAGCTTAGACAAGCAACCAAACAAGCCCTTCAATTGCTTCAAGACAATTATCCTGAATTTGTGGCTAAACAGGTGTTCATCAATGTGCCATGGTGGTATTTGGCTGTGAATAGGATGATAAGTCCTTTCCTTACACAGAGAACCAAAAGCAAGTTTGTTTTTGCTGGTCCTTCCAAATCAACTGAGACCCTTTTGAGCTACATAGCTCCAGAGCAACTCTCTGTGAAGTATGGTGGATTAAGCAAAGATGGTGAATTTGGAAATTCAGATGCTGTTACTGAGATCACAATAAAGCCAGCATCAAAACATACTGTTGAATTTCCTGTTACTGAGAAATGTTTACTGTCTTGGGAGGTGAGAGTAATAGGGTGGGAGGTGAACTATGGTGCAGAATTTGTACCAAGTAATGAAGAAAGCTACACAGTAATTGTTCAAAAGGCTAGAAAAGTGACTTCATCAGAAGAACCAGTGCTTTGCAACAGTTTTAAAATTGGTGAACCTGGGAAAGTTGTTCTTACCATTGACAACACAAGTTCTAGGAAGAAAAAGCTCTTGTACCGTTTGAAGACCAAGTCTTCACTCTTTGACTGA 1695 0.4012 MSHDESSPNQTTPQDSLLVETDVNVPQPEKTAIIPLESEQEDSHPEPQEKNKNNNNPVVETVTLQTHFSKPDTDSADTFKEEQTTKTSESDLSQNENKPLQELKNLIQQALNNHEFSSPSPIKEEKPSTTTVAAAPENATPAEEPAQPKVEEEVETKKEEEKEQQEEEVKETVQVASVDDDDGAKTVEAIEESVVNIAVSSSVPAEHEQSVAEKVEASLPLAPEEVTIYGIPLLADERTDVILTKFLRARDFKAKEAFTMIKNTILWRKEFGIEELMDEKFGDELEKVVYMHGFDKEGHPVCYNIYGEFQNKELYKKCFSDEEKRQNFLRWRIQFLEKSIRNLDFNNAGICTIVQVNDLKDSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSTETLLSYIAPEQLSVKYGGLSKDGEFGNSDAVTEITIKPASKHTVEFPVTEKCLLSWEVRVIGWEVNYGAEFVPSNEESYTVIVQKARKVTSSEEPVLCNSFKIGEPGKVVLTIDNTSSRKKKLLYRLKTKSSLFD* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0755 564 MobiDBLite consensus disorder prediction 88 136 - -
Tpr3g0755 564 ProSiteProfiles GOLD domain profile. 457 558 IPR009038 -
Tpr3g0755 564 Gene3D - 205 270 - -
Tpr3g0755 564 Coils Coil 147 175 - -
Tpr3g0755 564 SUPERFAMILY CRAL/TRIO N-terminal domain 90 279 IPR036273 -
Tpr3g0755 564 MobiDBLite consensus disorder prediction 1 170 - -
Tpr3g0755 564 MobiDBLite consensus disorder prediction 73 87 - -
Tpr3g0755 564 MobiDBLite consensus disorder prediction 50 72 - -
Tpr3g0755 564 Gene3D - 272 461 IPR036865 -
Tpr3g0755 564 PANTHER PATELLIN-3 PROTEIN 23 564 - -
Tpr3g0755 564 SMART CRAL_TRIO_N_2 239 264 IPR011074 -
Tpr3g0755 564 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 278 453 IPR001251 -
Tpr3g0755 564 MobiDBLite consensus disorder prediction 35 49 - -
Tpr3g0755 564 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 458 557 IPR036598 -
Tpr3g0755 564 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g0755 564 Gene3D GOLD domain 462 558 - -
Tpr3g0755 564 Pfam CRAL/TRIO, N-terminal domain 234 263 IPR011074 -
Tpr3g0755 564 PANTHER PATELLIN-1 23 564 IPR044834 GO:0008289
Tpr3g0755 564 Pfam CRAL/TRIO domain 287 447 IPR001251 -
Tpr3g0755 564 MobiDBLite consensus disorder prediction 146 170 - -
Tpr3g0755 564 SMART sec14_4 283 450 IPR001251 -
Tpr3g0755 564 CDD SEC14 284 448 IPR001251 -
Tpr3g0755 564 SUPERFAMILY CRAL/TRIO domain 288 450 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0755 Tpr-Chr3 7207287 7210982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0755 243 427 Acyl Lipid Metabolism Gene Families AT1G55840 26.289 1.53e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0755 - - gmx:100788197 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0755 3 7207287 7210982 Tpr3g0755 3 7207287 7210982 ECH
Tpr3g0755 3 7207287 7210982 Tpr3g3228 3 35451822 35455409 PCT